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13-4014-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)
    (Seed yield::semi-sterile)

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 142282 [Map]; Strand: w
      • AT1G01360.1 - [+] show detail - regulatory component of ABA receptor 1
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 13-4014-1 - 5-prime edge 
    ATCAACATCT GTGCAGAGAA AACCAGTGTA CCTCTGCTCT TGTCAAACAC 
    ATCAAAGCTC CTCTTCATCT CGTAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 142166 [Map]; Strand: w
      • AT1G01360.1 - [+] show detail - regulatory component of ABA receptor 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-4014-1 - 3-prime edge 
    ATGTTGATGA TGCGTCCGTA CGTATTGCAC CGTCTCGAGA CCACCGTACA 
    TCGCCGTGCC GCCTTCAACG CCGTCCATCA TATCTCTCTC TCTCTCTCTC 
    TCTCTCTCTT TCNNTCTTCG GTGTTATCTC ACAGGGGAGA ATCTGTGGAN 
    NNGGATAATA NANACAGGGA ANAANAAAAA NATGCTTCNT TATGCCAAAA 
    CAAAANCACT TGTNTATGTT TTNNGGTTTC TTTTANNGAA CCCACCGACA 
    TAATANCTTT TTACTTNTGT ACNTAAACTC TTTTNTATAG CTCNCTTCTT 
    CTCCTNCACA CATTTNNAGC TTTTCANACC ANACAAACAC ACAACNAGAT 
    ACTANTTTTT TANTGTNACA AANAAACAAN ATATTTAAGC NAGTTTTATT 
    GTNTGACGTT GGGGGGACCT ATATNATCCN AANAAAACAA AACAGANNGC 
    NTATATAATT ATNTGTTNNG ATTNGGAAAG ATCGTCACAN ACTTTATAGA 
    TAGTTGTGTT AANAAAAATT CAATTGNANA CCATATNCAN TATAATAGCT 
    AATTTTAAAC ACACANANTG TGGTTAATAN NCCAGANATT TATAAGNGAG 
    NGATTCCNNC NNGCCNNGGG TCTTATNTGT TNTANAACCA CATNTTATNA 
    NATATANCTN TNNGNNCCAT AAAAANCNTT GNNNNAAACA NNAATTANTT 
    GTATCACGNN TANGNGNNAA NCCCCCTTTC TTTNTGGNAN G

AT1G01360.1

Model type
Protein coding
Short Description
regulatory component of ABA receptor 1
Curator Summary
Encodes RCAR1 (regulatory components of ABA receptor). Interacts with and regulates the type 2C protein phosphatases (PP2Cs) ABI1 and ABI2. Functions as abscisic acid sensor.
Computational Description
regulatory component of ABA receptor 1 (RCAR1); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: PYR1-like 7 (TAIR:AT4G01026.1); Has 395 Blast hits to 395 proteins in 28 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 392; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR