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13-4054-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13881177 [Map]; Strand: w
      • AT4G27870.1 - [+] show detail - Vacuolar iron transporter (VIT) family protein
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: 13-4054-1 - 5-prime edge 
    CTTCTGCGTC TCTCGTTTGA CTTTTAAAAA CTCGAGCACT ATTTTCTTAA 
    TATGATGGCA GTTGCAAAAT CAAACGATAC AAGCAAAGTT GGCAACCATG 
    GAGCTGTTGT TGAAGACGGA CAAAAGTTTC TGGCTCCTAC GGCGGAGGAA 
    CAAACACAGC AAAAGATTGA CAATGATGAT TCTAGTACAG TAGACGGGAA 
    CCACACGTCA GACAAAGGAC GTTTCTCCCC AATTGAACCA TCTCATGGCA 
    TGAGTATATT AAACACAGTG ACTAACGGAC CCGACGGAAT TAGTGTACAA 
    ACTACATTTC ATGAAGAAGG GGCCCCTCTT CTGTTTGAAG GAAAAGACAC 
    TTCTGACACA NGCAAGCCAN ATTTTGGTCT GACCAAAGTA NCAGGTAATC 
    TTAATTCTGT TTATAATGGC GCGAGGAAAT CATATTCCTA GCTTCANTGT 
    CAAATACGTA CGAATTAANA CCTGGTTTTC TGTCTCTCCN TTTNGTNNAA 
    ANATTAAGGG NCCTTANCNG TTCTGGTCTA GTTNCATTCT NNATACATAC 
    CTTNNNAACC TCTNCGCTTN TTGTCNAGGT GGTNANNGNA CNCNAGGNNA 
    NACNAGGANT CCTNCACCCG GTACANCANA TTNCNNGAAN NTGATATTNA 
    NCCACGGNAA TTCNCTNNCA AAAAGGGTCN CNTANNGGNA TNNNNNNTTG 
    ATNNTANTTN TANNNTCANN GGTCTATATA TANNAGTT

AT4G27870.1

Model type
Protein coding
Short Description
Vacuolar iron transporter (VIT) family protein
Computational Description
Vacuolar iron transporter (VIT) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217); BEST Arabidopsis thaliana protein match is: vacuolar iron transporter (VIT) family protein (TAIR:AT4G27860.2); Has 285 Blast hits to 248 proteins in 70 species: Archae - 2; Bacteria - 30; Metazoa - 59; Fungi - 10; Plants - 112; Viruses - 4; Other Eukaryotes - 68 (source: NCBI BLink).
Link
InterPro Scan - TAIR