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13-4225-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3759191 [Map]; Strand: c
      • AT1G11210.1 - [+] show detail - Protein of unknown function (DUF761)
        Distance: -2193; Region: intergenic
      • AT1G11220.1 - [+] show detail - Protein of unknown function (DUF761)
        Distance: 671; Region: intergenic
    Flanking Genome Sequence: 13-4225-1 - 5-prime edge 
    GGGNTAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCGATAAT GAAGAAAATG AAGAAGGGAG CCTCATGCTC 
    TTATTTTCGA TAATTCGATT TATAATCACT GTAAAAAATA AAAATAAAAA 
    TGTATAACGA GAAATCTGGA GCCAATAATC ACNGTGTTAG ATGTGACACA 
    CACNGAGACA TATTTTGTTA TAACCCTGGA CTGGACAGTG AACGGTGCTT 
    ACTGCTTGCT TAGCAACGAC TCTTCGGTCG ATAATGACAC CATCTTTACG 
    TGCGATCGTA TTATTGGTCG TTTAACTATC GACGGGGAAA ATTAACAAAA 
    CGAATTAATT ATGGACGCGT CCAACTATTG GATTTTCTTG GATTCTCATC 
    CAAAAGAGCT TTCACTCTTT TAGGCCGTGA AATCTAACGG TCGAACGTCA 
    GACAAACTTT GCGACTCACT CTCACCATCA AAGTCACATC ACAGGGCAGT 
    TGGATCGCTG TTCTTGTTCT GTATTTCGAA GAAGTTTCGT TTGCCACTTC 
    TTTTTATGTC GGTAATATAT TAACTAAAAT TGGAATTTCG TATTGCTCTT 
    CTTGTGCTAG ATGAGATGTG AATCAAATGA AGCATGGGGA TATTATTATT 
    ATTGTGAGAA CGTCAAAAAT ACCTTTTGAA ATTTCTTACC TTCTAATTTG 
    TTAAAGACGG AATGTCATTG TCTGTAATTT TCTTTTTATA AGTATATAAT 
    AATTTAGTAC ATCGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3759186 [Map]; Strand: c
      • AT1G11210.1 - [+] show detail - Protein of unknown function (DUF761)
        Distance: -2188; Region: intergenic
      • AT1G11220.1 - [+] show detail - Protein of unknown function (DUF761)
        Distance: 676; Region: intergenic
    Flanking Genome Sequence: 13-4225-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
    TTTTTCTGCA TATCCTTCTC AGATTTTACG TACATCTCCA CTATACTCAC 
    AATTCACAAG GACCTCGACC ATTAGCTCTT CCAATTTGTT ACGCGTTGTT 
    CATATGCAAG ATTCAAACAA TACGAAATAA G

AT1G11210.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF761)
Computational Description
Protein of unknown function (DUF761); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761, plant (InterPro:IPR008480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF761) (TAIR:AT1G11220.1); Has 74 Blast hits to 74 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G11220.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF761)
Computational Description
Protein of unknown function (DUF761); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761, plant (InterPro:IPR008480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF761) (TAIR:AT1G11230.1); Has 88 Blast hits to 87 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR