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13-4267-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5131750 [Map]; Strand: c
      • AT1G14870.1 - [+] show detail - PLANT CADMIUM RESISTANCE 2
        Distance: -2227; Region: intergenic
      • AT1G14880.1 - [+] show detail - PLANT CADMIUM RESISTANCE 1
        Distance: 785; Region: intergenic
    Flanking Genome Sequence: 13-4267-1 - 5-prime edge
    GNGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATAGCG GCTCTTACAC ATTTCAAATT TTGTCAGTCT
    TTAAGTGTTT ATGATTAGTG ATGTATATAT AAGAAAATGA AACTATTATT
    ATGCACGTAC ACTGTTTATT TTCCACTATT AATTTAATTC AAACTATTCT
    ACATATCGAT TTAATTTCCA CGTCAGAACG AATCGGAACC TTCGTATTGT
    TCTGAATGTT GTGGACGGCT TCACCAAATT CTCCCAGTCA ACACGCAAAG
    GCCAAAAGGC AAAGTGGACC AATGAGCTAA GATATTGGTA CATGTTGTAA
    TAATTTACAG AGACAAAAGA TGGCCATATG GTAATGATGA TAGTTAGTTA
    GCTACATACA TCCATCCGAC GAATT
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5131813 [Map]; Strand: c
      • AT1G14870.1 - [+] show detail - PLANT CADMIUM RESISTANCE 2
        Distance: -2290; Region: intergenic
      • AT1G14880.1 - [+] show detail - PLANT CADMIUM RESISTANCE 1
        Distance: 722; Region: intergenic
    Flanking Genome Sequence: 13-4267-1 - 3-prime edge
    GATGTAAGAT TTTTCTTTAT TTGATAATTT CAACTTGTTT TTTTCTTGTT 
    TTGATCTTCT TAATAGTGCA AGGCTAGTGG GTGTACTTGT TGAGCTGCCG
    TAGATGCTTT ATTAATCTCA CCGGCCATAT AGGTTTAAAG GCCCAAATGT
    ATATTTTTTT CTGTATATGT TCGAAGTTAG TATCACCTTT ATTAACACAC
    CCTGTTAACA AATATGGCTC ATTAAAGTGA ATTGGACCAT GACTTACAAG
    GATTCTAACG CACAATATAA TGATCATATG TGAAACTCAC TATAAGAGAT
    TACCAAAGTA CAATTTCAAA CTTCATTATG AAGATGAGAT GCTTCTTATT
    AAAATGCGTA ATCTTATTTA CTAAGAGAAT AAATAAAAGA GAGCTTATGA
    TGCATTCAAT TACGAGTACA ACTGTATGTT TAAGAAAAAC AAAAATACTA
    GTTGTTGTAC TTGTAAGAGA GAATAAAGAT GTGTTGTCGA AAAAAAAAAA
    ANNNNCCNTA AANTGGGNAG GGNCCNNAAA AAAAAACCCT TTNNCCNANN
    CAAAAGCCNA ANCNAGGNNN GNANNNATAN GGNCCTNAAA TNNANGGNCC
    NANANCNTTT AAAANANTTT AAANTTNTNN TTGCGGGGAA NTTCNAAAAA
    ANCTTTTTTN NNTTTNNTTT AAAAAAAAAA ATTTTTTTTG NTTTTTCCAN
    GTNNNCACCC CT

AT1G14870.1

Model type
Protein coding
Short Description
PLANT CADMIUM RESISTANCE 2
Computational Description
PLANT CADMIUM RESISTANCE 2 (PCR2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT5G35525.1); Has 803 Blast hits to 802 proteins in 112 species: Archae - 0; Bacteria - 0; Metazoa - 123; Fungi - 115; Plants - 527; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G14880.1

Model type
Protein coding
Short Description
PLANT CADMIUM RESISTANCE 1
Computational Description
PLANT CADMIUM RESISTANCE 1 (PCR1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLANT CADMIUM RESISTANCE 2 (TAIR:AT1G14870.1); Has 778 Blast hits to 777 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 123; Fungi - 110; Plants - 511; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).
Link
InterPro Scan - TAIR