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13-4343-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3328267 [Map]; Strand: w
      • AT1G10155.1 - [+] show detail - phloem protein 2-A10
        Distance: 0; Region: intron1 (CDS)
      • AT1G10160.1 - [+] show detail - transposable element gene
        Distance: -704; Region: promoter
    Flanking Genome Sequence: 13-4343-1 - 5-prime edge 
    GTGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATACTA TTAACCAAAG TTTGATTTTT AGTTGCAAAA 
    AAAAAAGTTN GATNTTTAGT TGCAATAAAA TACCCAACAT ATATAAAATA 
    ACTTAAGNGA AAAAACTAAT AACAATNGAC CTNGTTATTA CATCTNGTTC 
    CATGTNGGAT TCTGCCTCGT AGNGANAACT CTTGACAGCT TTTNGGACAN 
    ACATTTCTCT CTTTCTTNTT TGCTGTTGGT TNATAAAANA ACNCTTCTNT 
    TAAGTNGGCT TTATATANAN ATTNGTTTCT TTTCACTATA TGGAAACTTT 
    CTGTAAAAAA AAATTAGTNT NGGGACANAA NAANAATAAA TGAAGTNGGA 
    CCCAATCTTT TNTTNTNAAT ATTCTCCTTG NAAGTTTTAC TTTAGNGCCA 
    TANCCATGTA AAAGGTNTAA TTCAATNGGA NGGCAAAANC TAAAGCAAAT 
    NTTCTNAGTT GGGGGCTCTT CTTCTATCTC NGCTTTGGNA TGAAAATCAA 
    ANGATCNCAT NTTNGATTTC AATTNGCCAA ANAGNGAAAT TTTTGAAACT 
    GTAATGAAGT TTTGAACTAG TTGGCCTTTG NCATTTTANA TTCCTATGTC 
    CTAATGATGT TCTANATTTT ATTCTCNATA ACAATTTTTG CTAGGGGGCA 
    NAATATGACA CATATGGGAA GGGCTTGAAT TGNGGCAAGT NTGGGCATTT 
    AATAAGCCGT TGTCTCATCC C

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3328263 [Map]; Strand: w
      • AT1G10155.1 - [+] show detail - phloem protein 2-A10
        Distance: 0; Region: intron1 (CDS)
      • AT1G10160.1 - [+] show detail - transposable element gene
        Distance: -708; Region: promoter
    Flanking Genome Sequence: 13-4343-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCAATAA 
    TAGATTGTTA GAAAAGCATG GGTCTTTAAG CCAAGTGGTC TTAATTTCAT 
    ATGGGGAGGT GATTCTCGGT ATTGGGTCAT CCCTAACGAA GACAGGTTGG 
    TACACACCCT TCATCTTACG TTATATACAC ATTAACCAAA ATAAAAATCA 
    GTTTGATTCT GAATAAACCG GTTTTTGGTT TTCCATGTTA AAAGTAAAAT 
    AATAAACTGG AGTCTTTTGG TGTTTTCAGG ACGCCTGCTG AACTAAAGAA 
    AGTGAGTTGG TTAGAAGTAA CCGGTTCGTA CGACAAGATA GAACCAGGCA 
    AAACATACCG AATTGGTTTT AAAATCTCGT TCACAGCTGA TGCAACCGGA 
    TGGGACCAAG CTCCAGTTTT CATGTCAGCA AAAATTGGAA AGAAAGGGAG 
    GACAATTTGG AAGAGGATCA AATCGGTTAA CAATAACTTT GACAAACTCA 
    AAGGCGGAAC CGGACCGGTT AACATACCAG ATGAGACTGA TGGTCGGTTT 
    GAGATCTTTG TAAGTCCCAA GGTAGCAATA AACCAAGACA CCAAGCTCCA 
    ATTTGGTTTG TATGAAGTGT GGACCGGAAA ATGGAAAACA GGCTTGTTGA 
    TCTATGAAGC T

AT1G10155.1

Model type
Protein coding
Short Description
phloem protein 2-A10
Computational Description
phloem protein 2-A10 (PP2-A10); BEST Arabidopsis thaliana protein match is: phloem protein 2-A9 (TAIR:AT1G31200.1); Has 113 Blast hits to 113 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G10160.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 3.9e-39 P-value blast match to GB:AAA67727 reverse transcriptase (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR