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13-4378-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 1427997 [Map]; Strand: c
      • AT2G04190.1 - [+] show detail - TRAF-like family protein
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: 13-4378-1 - 3-prime edge 
    TCCCCAAGTG GATGAAACAA CTGCATTTGG CTTATGACCT TGAGCATATA 
    GGAAGATTTT GATTGCTTGT GATCTTCCAT CTCCGGTACC TTTAGGGTTA 
    ACTCCTAATC TCCTGATTAT ACATCAACAA AAAACCATTA TTATACNTTG 
    ACCACTACGC AATGCACACA ACAGATGCAA TCTATAAGAC TTTTTTGCAA 
    ACTATATAGG GTCTAAAAAA TATGGCTACC AAAAGTACTA ACCAGTATCG 
    GTCTTCAACC AGAAAATCAT CAGAGTAATA GACTATATCC TCCAAAGTAG 
    AGAAATGAAG TATCTTCCAA GTGAAAACAT TGTTTGGAGG GTTTGATATG 
    AATGTGACTT TCTCTTGTAC CTGAATCGGT GGACAAAGAA AGATC

AT2G04190.1

Model type
Protein coding
Short Description
TRAF-like family protein
Computational Description
TRAF-like family protein; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like family protein (TAIR:AT2G04170.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR