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13-4382-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 20166622 [Map]; Strand: c
      • AT1G54020.1 - [+] show detail - GDSL-like Lipase/Acylhydrolase superfamily protein
        Distance: -2884; Region: intergenic
      • AT1G54030.1 - [+] show detail - GDSL-like Lipase/Acylhydrolase superfamily protein
        Distance: -1007; Region: intergenic
    Flanking Genome Sequence: 13-4382-1 - 5-prime edge 
    TATACCGCGG GTTAAAATCT AGTATAACTT CATTTTACAT CCACTTCCAT 
    GTGAACAAAT GATAAAATTA TTATTTTATT TAGAAAAGTT TTATAGTATT 
    TTTCTCATGT TTATTTTCAA AGATTACAAA CAATTTTGAA CTTGAATTTG 
    AAAACTGAAT TTGGAATCAA AATAAACCAA TTATTACAAA AAATATTAGC 
    TTATAAATTT CAAAACTTAT ATATATGAGT AATTTATATT TGAGGAATT

AT1G54020.1

Model type
Protein coding
Short Description
GDSL-like Lipase/Acylhydrolase superfamily protein
Computational Description
GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G54010.1); Has 2776 Blast hits to 2750 proteins in 64 species: Archae - 0; Bacteria - 18; Metazoa - 0; Fungi - 0; Plants - 2758; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G54030.1

Model type
Protein coding
Short Description
GDSL-like Lipase/Acylhydrolase superfamily protein
Computational Description
MODIFIED VACUOLE PHENOTYPE 1 (MVP1); FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: intracellular protein transport; LOCATED IN: plant-type vacuole membrane, endoplasmic reticulum, vacuole, ER body; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G54010.1); Has 3257 Blast hits to 3227 proteins in 154 species: Archae - 0; Bacteria - 207; Metazoa - 0; Fungi - 19; Plants - 3013; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Link
InterPro Scan - TAIR