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Mutant Lines
13-4427-1

13-4427-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 6294403 [Map]; Strand: c
- AT1G18270.1 - [+] show detail - ketose-bisphosphate aldolase class-II family protein
  Distance: -532; Region: promoter
- AT1G18270.2 - [+] show detail - ketose-bisphosphate aldolase class-II family protein
  Distance: -532; Region: promoter
- AT1G18270.3 - [+] show detail - ketose-bisphosphate aldolase class-II family protein
  Distance: -532; Region: promoter
- AT1G18280.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
  Distance: 0; Region: exon1 (CDS)

GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCTCC ATTTCAAAAC GTTAAATATC TCTTTGTATT 
ATGTTCTTTC TATCTTTAGT TGGTTGTGAA GATGTGAAAG TTGTAAAACA 
TGCGTGTGGT TTATATATGT ACGTACACAA GGTGGTTATA ATTTTTGGTT 
TTTGAATTTA ATCCAGCTCA CCAGCCTGAT TTTTCGAGAT AATCAGTTTC 
TGATCCTATC ATTATGCATT GGAAACGAAG ACTAAGCTCT GGATTAATTA 
GAAAATCGTT ACATTTATTA TTACAGGAGT TGCCAATTTT AAGAGTTTAG 
ATGTTTGTTC ATATAGAAAG TGTAATGATA TGGTACCTTA AATGGAATGA 
TATCATATAT GTTTTCTCAC CTAACACAAT ACAACTTCTT ATCATTTTTT 
TTTAATAAAT ATGTATAATG TACNATTACT ATTTCTTTTT GATCAAAAAA 
GTTTTGCTTT TGGCANATAA GTTAAAGGCT AAAGGCTGTT GGATATGGAC 
TTCCACGTAA NAGCCTACAC NATGTAACGT TACATTAATC TCAATTTGTT 
AAATTATAGT ATCATATNTT TNTNTNTAGA GAGAGAGANA CAGAGAGANG 
CGTANNAAAN NGGTTTGNNG ACTGTAAATC ACNTCGGAAA ATTGTNGTGA 
TCNGAAAAAA NGAGNGGCGG GGNGGGGTNN GNNGNNCTNN ATTCTTTCAN 
NTNAAAANNA NNTN

AT1G18270.1

Model type: Protein coding
Short Description: ketose-bisphosphate aldolase class-II family protein
Computational Description: ketose-bisphosphate aldolase class-II family protein; FUNCTIONS IN: in 8 functions; INVOLVED IN: oxidation reduction, pentose-phosphate shunt, valine metabolic process, glycolysis, metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), Ketose-bisphosphate aldolase, class-II (InterPro:IPR000771), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), Protein of unknown function, DUF1537 (InterPro:IPR010737), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyisobutyrate dehydrogenase-related, conserved site (InterPro:IPR002204); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT4G20930.1); Has 34046 Blast hits to 22505 proteins in 2700 species: Archae - 264; Bacteria - 21742; Metazoa - 568; Fungi - 820; Plants - 423; Viruses - 1; Other Eukaryotes - 10228 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G18270.2

Model type: Protein coding
Short Description: ketose-bisphosphate aldolase class-II family protein
Computational Description: ketose-bisphosphate aldolase class-II family protein; FUNCTIONS IN: in 8 functions; INVOLVED IN: oxidation reduction, pentose-phosphate shunt, valine metabolic process, glycolysis, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), Ketose-bisphosphate aldolase, class-II (InterPro:IPR000771), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), Protein of unknown function, DUF1537 (InterPro:IPR010737), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyisobutyrate dehydrogenase-related, conserved site (InterPro:IPR002204); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT4G20930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G18270.3

Model type: Protein coding
Short Description: ketose-bisphosphate aldolase class-II family protein
Computational Description: ketose-bisphosphate aldolase class-II family protein; FUNCTIONS IN: in 8 functions; INVOLVED IN: oxidation reduction, pentose-phosphate shunt, valine metabolic process, glycolysis, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), Ketose-bisphosphate aldolase, class-II (InterPro:IPR000771), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), Protein of unknown function, DUF1537 (InterPro:IPR010737), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyisobutyrate dehydrogenase-related, conserved site (InterPro:IPR002204); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT4G20930.1).
Link: InterPro Scan - TAIR

AT1G18280.1

Model type: Protein coding
Short Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G73560.1); Has 517 Blast hits to 515 proteins in 27 species: Archae - 0; Bacteria - 3; Metazoa - 3; Fungi - 0; Plants - 507; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link: InterPro Scan - TAIR