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Mutant Lines
13-4429-1

13-4429-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 19663062 [Map]; Strand: w
  - AT2G48060.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
    Distance: -445; Region: promoter
  - AT2G48070.3 - [+] show detail - resistance to phytophthora 1
    Distance: 0; Region: intron1 (CDS)
  - AT2G48070.1 - [+] show detail - resistance to phytophthora 1
    Distance: 0; Region: intron1 (CDS)
  - AT2G48070.2 - [+] show detail - resistance to phytophthora 1
    Distance: 0; Region: intron1 (CDS)
Flanking Genome Sequence: 13-4429-1 - 5-prime edge
```
CCCGCCGGAA TCTCCTCTCC CTTCCTCATC CTCTGCTCTC GGTAAAGACT 
TGAAAAAGGT CCGCCTTTTT TCTATATCAT TTACGATTTT TCTGTTGAAA 
CCATAGGAAG ACATGAAAAT GAAAATGCAC CATGTTAGAT TGGTCTCTAG 
TGCTTGAACC TGTTGAAAGA GTTGCTCAAG CT
```
3 prime edge [+] show sequence
1. Chromosome: 2; Position: 19662946 [Map]; Strand: w
  - AT2G48060.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
    Distance: -329; Region: promoter
  - AT2G48070.3 - [+] show detail - resistance to phytophthora 1
    Distance: 0; Region: exon1 (CDS)
  - AT2G48070.1 - [+] show detail - resistance to phytophthora 1
    Distance: 0; Region: exon1 (CDS)
  - AT2G48070.2 - [+] show detail - resistance to phytophthora 1
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 13-4429-1 - 3-prime edge
```
CCGGCGGGTC GTCCTTGGGT TCTAATCCGT CAGAGGTGGC GAAAATACGG 
AAGGTGGATC TTCTTCTATG GCGAAAGCCA TAAGTGAGAG CTATGGAAGA 
GGAGACCCCA TGGGTGCTGC AGAGAGACCA ACTCATTCTC TCCTCCAATA 
ATCGCGATAA GGAAGAAGAA ACTTGTTGGC TTTATTGAAC CGGTCCAATT 
CTCAACCGAA CTCCGGTATT CCAAATTAAA AGCCAGCAAT CAATAATTGA 
ATCTCGAGCC CACGACGGTT TGATTGGTTT AGCCATTTCT CGGCGCTAAA 
TATAATTTAT TAAAATGATG ATTATTGCGA GAAGAAAAGA TCTTTCTTTG 
ATTTTTGCTT GTGGATTTGG ATTTCCAGTT TCCAATTCTC TCAAATTTGC 
AATCCACCTT CAAATTCACA CACATCTTCA ACAGCTACCT TTTCGGGAAC 
TTGCTAGAAT T
```

AT2G48060.1

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, sperm cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341 proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa - 318; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G48070.1

Model type: Protein coding
Short Description: resistance to phytophthora 1
Curator Summary: Encodes a chloroplast protein RPH1 (resistance to Phytophthora 1). Involved in immune response to Phytophthora brassicae. rph1 mutant plants (in Ws background) are susceptible to P. brassicae.
Computational Description: RESISTANCE TO PHYTOPHTHORA 1 (RPH1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response to oomycetes, positive regulation of hydrogen peroxide biosynthetic process; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 47 Blast hits to 47 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G48070.2

Model type: Protein coding
Short Description: resistance to phytophthora 1
Curator Summary: Encodes a chloroplast protein RPH1 (resistance to Phytophthora 1). Involved in immune response to Phytophthora brassicae. rph1 mutant plants (in Ws background) are susceptible to P. brassicae.
Computational Description: RESISTANCE TO PHYTOPHTHORA 1 (RPH1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response to oomycetes, positive regulation of hydrogen peroxide biosynthetic process; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 47 Blast hits to 47 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G48070.3

Model type: Protein coding
Short Description: resistance to phytophthora 1
Curator Summary: Encodes a chloroplast protein RPH1 (resistance to Phytophthora 1). Involved in immune response to Phytophthora brassicae. rph1 mutant plants (in Ws background) are susceptible to P. brassicae.
Computational Description: RESISTANCE TO PHYTOPHTHORA 1 (RPH1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response to oomycetes, positive regulation of hydrogen peroxide biosynthetic process; LOCATED IN: plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages.
Link: InterPro Scan - TAIR