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13-4448-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 9236036 [Map]; Strand: w
      • AT2G21580.1 - [+] show detail - Ribosomal protein S25 family protein
        Distance: -487; Region: promoter
      • AT2G21580.2 - [+] show detail - Ribosomal protein S25 family protein
        Distance: -517; Region: promoter
    Flanking Genome Sequence: 13-4448-1 - 5-prime edge
    AACTAACAAA ATCGGTTATA CGATAACGGT CGGTACGGGA TGTTGACAAC 
    ATCCATAACT CGACCTTGCT TCTTCAGTCT ATCCATGGCG GATCTTCGAG
    GATAGGTGAT GGTTGCAAGA GAACCGAATA ACCGTTCGGT TATGGCCTGC
    CGAACCGAAC CGATTCGATA ACCGAATTCC ATAAATATTT TTGCCGATCG
    GTTCACTCTT CCTTTCAGCT CCGGCGCCGA TAACCGAAAA ACTCGGTTCT
    TTCGGTTCGG TTTCCTCGGT TTTTGCCGAA GTCCCAGGCC TAGAAAAAAG
    TAGAAAACAT AGAAAACGTG AATCAACAAA GCAGATTAAT AATAAAAGAG
    TATTTTCTAT TCGTAAGTTC TCTCAATTGT GTCCTAAAGT TTTCCGACGT
    TTCTCACATT TTCTTCATAA ACCATAATTT AATTGGGCTT AATAATTATA
    TTGGGTTTAT AAACATTAAT GGGCTTGTTG AACAAAGAAG AAAACATTAA
    TGGGCTTTCT CTGAGAAATG AAGCCTCTTA ACGCTGAGAG ACTCAGAAAC
    CCTAATATAT AAATAACAAA ACCAAAACTT CCTCACTGTC GTCTGCTCTT
    AAGCCTATCG TNTTTGCCTT TCGTCTCTTC TCTGCTCGCC NATCGTTACT
    CCGTCTCCCC TCGAAATCNC CATGGGTTAC CTCTCTCTCA NTCTCGATCT
    GTCTATCTGG ATCGCCTTNG TTGCTCTTNA AGAGAGAATC TAATTTTNGA
    AAATGTN

AT2G21580.1

Model type
Protein coding
Short Description
Ribosomal protein S25 family protein
Computational Description
Ribosomal protein S25 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S25 (InterPro:IPR004977); BEST Arabidopsis thaliana protein match is: Ribosomal protein S25 family protein (TAIR:AT4G39200.1); Has 687 Blast hits to 687 proteins in 237 species: Archae - 21; Bacteria - 0; Metazoa - 282; Fungi - 141; Plants - 145; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G21580.2

Model type
Protein coding
Short Description
Ribosomal protein S25 family protein
Computational Description
Ribosomal protein S25 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S25 (InterPro:IPR004977); BEST Arabidopsis thaliana protein match is: Ribosomal protein S25 family protein (TAIR:AT4G39200.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR