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13-4462-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 302091 [Map]; Strand: c
      • AT5G01770.1 - [+] show detail - HEAT repeat ;WD domain, G-beta repeat protein protein
        Distance: -107; Region: promoter
    Flanking Genome Sequence: 13-4462-1 - 3-prime edge 
    TCAATGAGTG TTGCGTTTTG TCTCCTCTTC TCTCTTTTCT CTTTTTTTTT 
    TTTTTTTAAA AAAAGNNANG AAAAANANCC CCCNGGNAAA AANAAAAAAA 
    TNGGNTTTTT TTNNAAAAAN NAAAAATNAN GGNAAAAAAG GGGGNCCCNN 
    NNNNTTTTTT NTTNCCCCAA AANNNNNNAA AAANTTTNNA NNNATTTTTT 
    TTNNTTTNNT TNNNAAANTN GGGNTTTTNN NNTTTTTTAA AAAAAAAAAA 
    AAAAAAATNN NNAAAATNNG GGNNNNNCTN TTTTTTNAAA AAATTTTTTN 
    NNTTTNGNAA AAAAGGNAAA AANNANNAAA ANNCCCNAAA ANAAAAANGN 
    AANCCCCCNG NGGGGNNCNG GNCCCCNNGN NAAAAAAANN GGGGNCCNGN 
    NTNGGGNNNA ANNNCCNCCC CCCCNGGNAA AAANTTNCNN AATNCCCCCC 
    NAAANNNAAN NNNNCCCCNG GNNTNAAAAA ANNCCCCNGG GNCNTTTTNA 
    AANNNTTTTT TTTNCCNNAA AAAAANCNNG GNAAAANCCC CTTGGGNNAN 
    GGNNCTTTTG GGNNCCCCTT NGGANAANCN NTTTTNNTTT NNNANGGGNC 
    CNNCCTNTTT TTNCCCCCNN NNNAAAAANC NCCTTTTTNG GGGGNANAAA 
    ACCCCNCNAA AAGGGNTNAA GGNCANCCNN CCCCCCCCNG GGGGGNACAA 
    AGNTTNCNNT TTTTTGGGA

AT5G01770.1

Model type
Protein coding
Short Description
HEAT repeat ;WD domain, G-beta repeat protein protein
Curator Summary
Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutations in this gene have no visible effects on embryo or plant development.
Computational Description
RAPTOR2 (RAPTOR2); FUNCTIONS IN: binding, nucleotide binding; INVOLVED IN: cell growth; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), WD40 repeat (InterPro:IPR001680), Regulatory associated protein of TOR (InterPro:IPR004083), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: HEAT repeat ;WD domain, G-beta repeat protein protein (TAIR:AT3G08850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR