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Mutant Lines
13-4470-1

13-4470-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 14740319 [Map]; Strand: c
- AT2G34930.1 - [+] show detail - disease resistance family protein / LRR family protein
  Distance: -415; Region: promoter
- AT2G34940.1 - [+] show detail - VACUOLAR SORTING RECEPTOR 5
  Distance: -149; Region: promoter

GCAACTACTG TTTCGAATGT TTCTCTGATG ATTATTGTTC TCTAACCAAT 
TATTAACGGA GAGGCAAATT TAAAATTAAA ATTTGGGAGG CTTTCAAAAA 
TCCTTAATGG GCCTCATTAG CCCATTAAAA GTCCCAATTT AAAATATTGT 
AATTGCTATT ATAGAAAGAA AGAAAAATGA AGGTCGGTGT TAAATAAAAA 
AAATGAAAAA ATTAACGAGT GGTAGTCAAA TACAACCCCA CACGAGCCAT 
GTGAGTGAAT GATGCTCAAA TATCGATTTG CACTAACTTC AATGCGCACC 
AGCCAAAATA ACACGTTTCC ATTTTCGTAT TTTATACAAT GATATAAACC 
GTGTCGTATT TGTTAAAGAT ATACACGTAT ATTTGTATAC ATATATTCAA 
TTTGTATATG TATATACATA CAATGCTGGT CTAATATGTC CGCGTTTGAA 
CATATATATA TCTAAACGTC TGAGAAAAGA AACAACACAA ACATAGCTTC 
AAGTATGGAC CTCAAGCTAA GGCCTAGCTT CTTCATCTCT TTTCTGATTC 
TCATTTTACT TCTCAAAAAT CTTAATTACG GATCTGCAGC TAGTCCGAAA 
TGCATATCCA CCGAGCGGCA AGCTCTTCTC ACCTTCAGAG CAGCACTAAC 
TGATCTTTCN AGTAGGCTCT TTTCTTGGTC CGGACCTGAC TGCTGCAACT 
GGCCCG

3 prime edge [+] show sequence

Chromosome: 2; Position: 14740435 [Map]; Strand: c
- AT2G34930.1 - [+] show detail - disease resistance family protein / LRR family protein
  Distance: -531; Region: promoter
- AT2G34940.1 - [+] show detail - VACUOLAR SORTING RECEPTOR 5
  Distance: -33; Region: promoter

GTAGTTGCAG AGTCATGGTA GCTCCGCTGA CTCTGCCAAC TCGTCGTCTC 
TTCCGTATAC ATTAAGGTTC AGCTCAGTTT TTCTCGGGAA AAAGAGATTC 
TTTTGTCGAA AAGAATGTCT CCGAGCAATA AAGGAACCGT CTTGGCTCTG 
ATTCTAGCGT TGACCATGGT GGTGGTCAAC GGGTTTTCAT CGAGATTCTT 
CGTGGAGAAA AGCAGCTTGA CGGTCCTTAA CTCATGGGAA ATGGGAGCTA 
AGCACGACGC GGCCATAGCA AACTTTGGTC TCCCAAAGTA CGGCGGTTTC 
ATGATCGGCT CTGTGGTCTA CGCAGGCCAA GACGCTTACG GATGCAACTC 
TTTCAACAAA ACCTTCAATA CCAAGTCTCC TTATCCCAAA ATTCTCCTCA 
TTGATCGTGG AGGTATAATC CGAGAGTTCA TAGTGACATT TTCAACAAGA 
ATATGATTGA AAGTTTGAAA CTACTTTTTT TGTTACCATT GTGATTGAAG 
TTTAGTTCTG ATAGATTTGA AGGGTTTGTA TCTTTGTTAA CCGACTCTAC 
AATGTTTTTC ATTTTTAGTG TGTAACTTTG CTTTGAAGAT ATGGAACGGA 
CAACAATCCG GCGCAGCGGC TGTTCTTTTA GCAGATAACA TTGTTGAGCC 
ATTGATAACA ATGGATACAC CCCAAGATGA AGATCCTGAC TTTATAGACA 
AAGTCAAGAT CCCATCAGCT TTAT

AT2G34930.1

Model type: Protein coding
Short Description: disease resistance family protein / LRR family protein
Computational Description: disease resistance family protein / LRR family protein; INVOLVED IN: signal transduction, defense response to fungus, defense response; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 135121 Blast hits to 32840 proteins in 1181 species: Archae - 56; Bacteria - 8201; Metazoa - 34800; Fungi - 1569; Plants - 79859; Viruses - 2; Other Eukaryotes - 10634 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G34940.1

Model type: Protein coding
Short Description: VACUOLAR SORTING RECEPTOR 5
Computational Description: VACUOLAR SORTING RECEPTOR 5 (VSR5); FUNCTIONS IN: calcium ion binding; INVOLVED IN: protein targeting to vacuole; LOCATED IN: integral to plasma membrane, Golgi transport complex; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF-like calcium-binding (InterPro:IPR001881), Growth factor, receptor (InterPro:IPR009030); BEST Arabidopsis thaliana protein match is: VACUOLAR SORTING RECEPTOR 6 (TAIR:AT1G30900.1); Has 10681 Blast hits to 5483 proteins in 264 species: Archae - 0; Bacteria - 175; Metazoa - 9320; Fungi - 5; Plants - 378; Viruses - 0; Other Eukaryotes - 803 (source: NCBI BLink).
Link: InterPro Scan - TAIR