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Mutant Lines
13-4490-1

13-4490-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 315860 [Map]; Strand: c
  - AT1G01910.4 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
    Distance: 0; Region: exon1 (5UTR)
  - AT1G01910.3 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
    Distance: 0; Region: exon1 (5UTR)
  - AT1G01910.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
    Distance: 0; Region: exon1 (5UTR)
  - AT1G01910.2 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
    Distance: 0; Region: exon1 (5UTR)
  - AT1G01910.5 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
    Distance: 0; Region: exon1 (5UTR)
  - AT1G01920.2 - [+] show detail - SET domain-containing protein
    Distance: -268; Region: promoter
  - AT1G01920.1 - [+] show detail - SET domain-containing protein
    Distance: -327; Region: promoter
Flanking Genome Sequence: 13-4490-1 - 5-prime edge
```
GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATGACT AGTGGAAGAG AGACGAGCAA GGAATTAGCA 
ATGGCGGCGG ATTTGCCGGA GGCGACAGTA CAGAACATTC TGGACCAAGA 
GTCTCTTAAA TGGGTTTTCG TCGGAGGTAA AGGAGGTGTT GGGAAGACGA 
CATGCAGTTC AATTCTCGCA ATTTGTCTCG CCAGTGTTCG ATCCTCCGTT 
CTCATCATCT CCACCGATCC TGCTCACAAT CTTAGTGATG CCTTTCAGCA 
ACGCTTCACT AAATCTCCCA CTTTGGTTCA AGGTTTCTCT AATCTCTTTG 
CCATGGTAAG CT
```
3 prime edge [+] show sequence
1. Chromosome: 1; Position: 315863 [Map]; Strand: c
  - AT1G01910.4 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
    Distance: 0; Region: exon1 (5UTR)
  - AT1G01910.3 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
    Distance: 0; Region: exon1 (5UTR)
  - AT1G01910.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
    Distance: 0; Region: exon1 (5UTR)
  - AT1G01910.2 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
    Distance: 0; Region: exon1 (5UTR)
  - AT1G01910.5 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
    Distance: 0; Region: exon1 (5UTR)
  - AT1G01920.2 - [+] show detail - SET domain-containing protein
    Distance: -265; Region: promoter
  - AT1G01920.1 - [+] show detail - SET domain-containing protein
    Distance: -324; Region: promoter
Flanking Genome Sequence: 13-4490-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAG 
TAGTCTCAAT CTAAAGAGCT CCTTGTTAGA TACTTGGCGT ACGGAAGAGT 
TTAACTGCGG CGAGAGACTT TTAACGCCGC CCGGTTCAAT ATTTTGGTTC 
TCGGTTTTGG GATATCACAG CAGTCTTGGT TTGATTTTTT TGGTTATCGT 
TTTTCACNTT GTTCAATTTT TCTTTTTTTG TTAAAAATTT AAATTTGGTG 
TGTTTAAGTT CATAAACGCT AAATAAGCCC ATACAAAAGC CCACATAGAT 
GAAGCCATTA CGACAGCGTA TTGTGAGTTA CGATTGAAAA CCCCTCTCTA 
CTCGGTTAAA CCCGTCGCCG GCATATTGAT CTTCGCCGGA GGATATGGCG 
ATTTCAGAAG AAGAAGCCAA ACTCGAAAGG TTCCTAGATT GGCTTCAGGT 
TAGATCCGGA TTAAGTGTTG TTTTTCAGTC CTGATCTGCT GCTCTATATC 
ATGGCATTTT GTGTTTCGAT CTAATTTCAT TCAGGTGAAT GGAGGNGAAT 
TAANAGGCTG CAACATCAAA TATTCTGACT CCCTAAAAGG NNTNGGCAGT 
ATTNGNTTNN AANTGNATAN NNCGNNNNNN NNNGGNNGNN NACNAGNCNN 
GGTNNTNTTN NNNNNNNANN NGNGNGNNNN NNNT
```

AT1G01910.1

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular metal ion homeostasis, anion transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, anion-transporting (InterPro:IPR003348); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G10350.1); Has 2854 Blast hits to 2413 proteins in 784 species: Archae - 172; Bacteria - 1905; Metazoa - 150; Fungi - 222; Plants - 105; Viruses - 0; Other Eukaryotes - 300 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G01910.2

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular metal ion homeostasis, anion transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, anion-transporting (InterPro:IPR003348); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G10350.1); Has 2854 Blast hits to 2413 proteins in 784 species: Archae - 172; Bacteria - 1905; Metazoa - 150; Fungi - 222; Plants - 105; Viruses - 0; Other Eukaryotes - 300 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G01910.3

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular metal ion homeostasis, anion transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, anion-transporting (InterPro:IPR003348); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G10350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G01910.4

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular metal ion homeostasis, anion transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, anion-transporting (InterPro:IPR003348); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G10350.1); Has 2854 Blast hits to 2413 proteins in 784 species: Archae - 172; Bacteria - 1905; Metazoa - 150; Fungi - 222; Plants - 105; Viruses - 0; Other Eukaryotes - 300 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G01910.5

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: anion transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G10350.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G01920.1

Model type: Protein coding
Short Description: SET domain-containing protein
Computational Description: SET domain-containing protein; BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT1G14030.1); Has 611 Blast hits to 608 proteins in 165 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 239; Plants - 164; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G01920.2

Model type: Protein coding
Short Description: SET domain-containing protein
Computational Description: SET domain-containing protein; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT1G14030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR