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13-4532-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2962396 [Map]; Strand: c
      • AT1G09170.1 - [+] show detail - P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calpon...
        Distance: -189; Region: promoter
    Flanking Genome Sequence: 13-4532-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT ACACATATAA GTGAATATTC TTGTATCTAT 
    CTACACAGCT TTGATTTTCT TTGTTCGGTT TTGGAAAAAT CTGTTTCGAG 
    TTAAGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2962401 [Map]; Strand: c
      • AT1G09170.1 - [+] show detail - P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calpon...
        Distance: -194; Region: promoter
    Flanking Genome Sequence: 13-4532-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATAGA 
    ACATTGCTCA GATTTATAAG GAAGAGAAAA TATAATGAAA GAAATTGAGA 
    GAGAACAAAA AAAATGTTTG ACCCTCTCTT TGTTTTTTTT TNGTTTTTTT 
    GNNGNCCTTT GTTNNAANTT AAACCACCNN AAAAAANAAC CNAANAAAAA 
    AACCCGNGGC TTGATTCAAA GGCCCCCGAG TCNCCNGGGT TTNTNTAAAN 
    GGNCAATTNC AATNTTATAA ANCNTTTNCN GTTNNTTNTN CTNAATNGCN 
    CCNTTTNAAT NTGTCCAANC TTNTNTACCT CCGGANTTTN TACCCCGTTT 
    NTGTANTTCC CANCCNTCCC CTAGGNTTTA TAANGGGAAT AAANAANTTN 
    GTCCTNNGTT TNANCAAAAN TTNTTACCNA TTCCANTNCC CAGTNGNTCT 
    AANCAAAATT GGNNTCNNTT NGTCCTANTA AGNAATCCCA TNGCCTTNTN 
    AAAATTNNTG TTNAANTTTN AAAAGTGCCT TNNGTACCTA GTTTTTTCCC 
    ATTAAAANNG GNCATTTNTT TNCAAAGCTN TTTTAATTCC TTNTAAGNAT 
    TTAAAAGGGG AAAAANAANT TNTGGGGNTN NCCANCCNGG NCCGTNNACC 
    CCNGGCCCCN NTTANNNNNN NNNGGNNNNG

AT1G09170.1

Model type
Protein coding
Short Description
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain
Computational Description
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: shoot, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 4 (TAIR:AT5G27000.1); Has 11983 Blast hits to 11146 proteins in 466 species: Archae - 0; Bacteria - 101; Metazoa - 5767; Fungi - 1479; Plants - 1905; Viruses - 0; Other Eukaryotes - 2731 (source: NCBI BLink).
Link
InterPro Scan - TAIR