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Mutant Lines
13-4533-1

13-4533-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 191879 [Map]; Strand: c
- AT2G01430.1 - [+] show detail - homeobox-leucine zipper protein 17
  Distance: -1510; Region: intergenic
- AT2G01440.1 - [+] show detail - DEAD/DEAH box RNA helicase family protein
  Distance: 1822; Region: intergenic

GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTACATCACC GTGATGTAAC AATTGTCTTA AACATTTTCT 
ATTCTTTTTG AAACGTAATA AACGCAAATC ATATCATGCA CCAACAAATA 
GAATCATTCT TTACAAACAA AAAAGAGTAA AAAATAATAA TGATAATCGG 
TAGTACCAAT TTATTTTGGA AATGTACACT AGATAACCCT GCATTTATAA 
TAGATTGATA ATTGACCTTG ACCTTTAAAA CTACATTTTT GTTGATTACT 
ATTTGACCAA CATAATTTCA CAAAAGTGCA TACAAATATT TTCATCAATC 
CACACGAAAA ATGACATACC CCTTTATTTC CTATTTTGCC ACCATAGTAA 
ACTACTTAAT AAAGGGGTAT ATGCTTTATT TAACCTAATT TAACCTTTAT 
TTTGTTGTGT ATAAGTCCTA ATGTTTGTAT AAACATAAGT ATAAATCCTT 
ACCTTTTGAA TAATAAGCT

3 prime edge [+] show sequence

Chromosome: 2; Position: 191870 [Map]; Strand: c
- AT2G01430.1 - [+] show detail - homeobox-leucine zipper protein 17
  Distance: -1501; Region: intergenic
- AT2G01440.1 - [+] show detail - DEAD/DEAH box RNA helicase family protein
  Distance: 1831; Region: intergenic

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
TTTGTGTAGT CACCACCACC ATATTGTGCG CGGTCGATCA AACACCACTT 
ATTAATCATT GTCTACTTCT TTTATTGGAA CATCCGAATA TATATCTGTA 
AAACACACTC ATCCAAATAA AGTTCTCCCA AACTTTATGG TTAATGGCNT 
TAAAAAGCAA TGCTAAAATT AAGCCTGGAC ATTCGGATTT TGGTTCGGAT 
TTTTTCGGAT TTGGATAATT TCTGATGAGG GAGTTTATTA TCCGTTTGGA 
TGATATGACT ATTCGGTTCA GTTTCGGTTT GGATGATGTC GGATTCGGAT 
CAATTTCTGA AAAAAGAAAC TAAAAAATTG TTCAATTTTT TTAAAAAAAT 
TGTTTAATTT TGCAAAACAT TGTATAATTA TAACAAATAT AACTAATAAT 
AATTCGGATA TCAAGGTTAT TTCTGATATT TGTGGATATA AATTATAACT 
AAATATAACT AATATTTTTA TATATATACC TTTATTTTGG ATTTAGCGGA 
TATCCGTTTG GTTTTTGGAT AGGATCGGAT TCGGTGGGAG AATT

AT2G01430.1

Model type: Protein coding
Short Description: homeobox-leucine zipper protein 17
Computational Description: homeobox-leucine zipper protein 17 (HB17); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-leucine zipper protein 18 (TAIR:AT1G70920.1); Has 8030 Blast hits to 8017 proteins in 519 species: Archae - 0; Bacteria - 0; Metazoa - 5631; Fungi - 276; Plants - 1985; Viruses - 4; Other Eukaryotes - 134 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01440.1

Model type: Protein coding
Short Description: DEAD/DEAH box RNA helicase family protein
Computational Description: DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: ATP-dependent DNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA repair, DNA recombination; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA helicase, ATP-dependent, RecG (InterPro:IPR004609), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box helicase, putative (TAIR:AT3G02060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR