1. Home
  2. Mutant Lines
  3. 13-4555-1

13-4555-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 10838237 [Map]; Strand: c
      • AT4G20000.1 - [+] show detail - VQ motif-containing protein
        Distance: -73; Region: promoter
    Flanking Genome Sequence: 13-4555-1 - 5-prime edge 
    CATAGGAGGT AGGATTAAGG TTTTACTTTA TATGCGGGAA GGAGATGTAG 
    CTAAGTCTTG ATGGTCGTTG ACGTTGACTA GTACCTTTGA GGATTTTAAT 
    ATGTTTATGT ACAAATAACN TTCAATATAA TAAATTGGGC AGTGTGTAAA 
    TCATTTGAGT GTTGAATAAG TATTTGAATT TTAAGTATTA GCATAATCTT 
    TTTCTTAATT TAACTAATTT ATGGTGTAAG AAATAGCCTG AGGATTCACT 
    AAATTGATGA AGACCAGGAT TCCAAATTTT ATTGTGATCA TTTTATTTAA 
    TGCTAAATTG TACACTTTTG GTTATATAAA AGGTTGTTCT CTTGAGTCTT 
    GACTTTGATG GTGGGTTTCC TAAGTGTAAG TAAGAATTTA ATTGAACTAG 
    TATAACTTTC ACTACTAATT CAATTATTGT AACTTTTTCA ATAGACGAAA 
    AATAAATCAT AAATCATTTT CTACTGGAAA AGAACTTGAT GACATACATC 
    CTCCAAATCA ACCGTACTAA AATCAACTAA ATATATCTCC CGGAATAAAT 
    TATTCTAAAA AAGATAATAG TTTGTTTGTA TCCAAAAGTT CCTAGACTAA 
    ATAAAATTAA GCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 10838301 [Map]; Strand: c
      • AT4G20000.1 - [+] show detail - VQ motif-containing protein
        Distance: -9; Region: promoter
    Flanking Genome Sequence: 13-4555-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
    TGCTCCTATG CAATGTATAC AAGCTACACC AAAGAAAAAA AAAANTTGAC 
    AAACAAATTT AAAATCCCTN TNAACAACTN TANAAAAAAC CAGNGGTTNC 
    AACNCCTNTG ANCAACAAAA TNTTCAANAA ATTACTCCGN GCTTNAACNC 
    CNTTAACATC GNGTNNTCGT CGGGATNTTC CNTTGGAAAC GGGGGNGCCG 
    CGGCNCATNA ANCTGCTGGA AGGAAATNTA GGGCTTCNAG GANAGCCNTA 
    CCAACAACCC TCCTAAACNC AAACCCTANC ANTTTCCNAN CCCTANTTCA 
    AAAATTTACC GGACGTTNTG CCGGAGGNGA ATCCANCCGC AAAAAAGGTC 
    CGGGGACTTT GGATTTCGGG TNTCCCACTA CAATNTCCAA AAAANCTNTN 
    TTTCCAGTNT CAANCNATCN AAGTANTAAC AATNTTGATC NTGNGGTCAA 
    CCAACNCGTG ANTAACNANC AGCGTCNCGT GACTNGGTCA GGTNCAAAAT 
    CAATGATGTC GTNTCAGTTA GGCNAGGAAA CTAACTCGGN GGTTTACAGC 
    AGCGGGTACA ATNATCAANA TNTTCCNAGG GAATACTCCG GGAATAGTAN 
    CTNTGATAAA AGTTTGGATC ACATGGATTN TTATCAANAT TTCCNCCGNG 
    ANACGGCAAC NTTGGAANAG TTTATGATGA NANATCTCGA TTTATAATAT 
    AGCTNGTTTT TAN

AT4G20000.1

Model type
Protein coding
Short Description
VQ motif-containing protein
Computational Description
VQ motif-containing protein; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); Has 92 Blast hits to 92 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR