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13-4580-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
vascular leaf (PO:0009025)
  • desaturated green (PATO:0001272)
    (Leaves::pale green)
sporophyte vegetative stage (PO:0007134)
  • abnormal (PATO:0000460)
    (Flowering & Growth::growth defective)

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7612947 [Map]; Strand: c
      • AT1G21680.1 - [+] show detail - DPP6 N-terminal domain-like protein
        Distance: -58; Region: promoter
    Flanking Genome Sequence: 13-4580-1 - 5-prime edge 
    GTCGGTGGTT GGCTACTAAG TGAAGACGAT AATCGAGTTT TTTTATAAGG 
    CGGAGGAATT TTTCAGAGAG TGGTGTAAGA GATGACGTCA TTATGGTACT 
    GTAGGGCCCT TTTGAGATAA GTTTACACNG TGGCAATCAG TCGTGGAATT 
    TTAACTTGTA ACGTTTCTGA CAAAAGTATA TTATTCATTT ATTCCACAGA 
    GGATATTTCT TTTCTTGTAT TCTACAATTA TCTACGTATT CAGAAAATAT 
    CTACTTGATA GGATAGGCAC TGTTTGGAAA AATAGTGGTC GGTCCATCTA 
    GCATGGACCA TGGTGCAAGC AGCACACGAC AATAATTCAA CCGTTGATTT 
    TATTTCCAAC ATCAATATTG ACCCAAATTA NNTTNAAAAA NNATTGAAAN 
    ATGCGAANCC CTCAAGCTAT ATAATTTCTT AGGCTAACCA AATACTTAAC 
    AAGATATGAA CTANCGGAGT TTTTGATTAN AAGAATAAGT TACATAACAA 
    ATCATTGTGA AGGAACAACA CACATTGATG ACATTGTTGC GGGCTTATTC 
    ATTTTCATTT TCACGGNAGT ATTTTGCGTC TTGAAATCTT GGATAGAGCA 
    ACTAGGGCCA AACCTNTTAG GCCAAGCCAC ATNACCNNTA NCTTTNATCT 
    TANGGAACCA CATGGGNGGN CCATNTTCCA CCGANTNATG CNTNANCCTN

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7613063 [Map]; Strand: c
      • AT1G21680.1 - [+] show detail - DPP6 N-terminal domain-like protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-4580-1 - 3-prime edge 
    CCACCGACCA ATCCGCCATG AATATATCTC AGATTATTTT CTTCGCGTCC 
    CTTCTTCTAC GGCTTCACTT ATCAACGGCG GAACATCAAA ATTCAAACGC 
    TGGTGATGGA GACACCATCA TATTCACCAC TCTAGGACGA TCGCACTACG 
    AATTTGACAT ATTCGCCCTC TCCACGACTC AACCGCCGTC AGTTTCCGGA 
    GAGCTCCGAA TCACCGATGG GGAATCGGTA AATTTCAACG GCTATTTCCC 
    GTCTCCTTCT CCGGCTCTAT TATCTCTCCT TCCCGACGAA ACCCTAATTC 
    AAATGGAAGA TTCGTCTCCT CTGCATCTCA TATACGTCAC CGAGAGAAAC 
    GGTACTTCTA GCTTGTACTA CGATCTAGTT TACGGCGGTA ATTCTGATTC 
    TAAAACGAAA CGAAGATCGG TGTTAGAAGC ACCGTCTCGA GTCCAAGTTC 
    CGTTGTTATC CCGCTTTGAT CATCTGAGTG GCATGACGGT AAATTCTTTT 
    AAAGATAAGC CTAGTTTGAG TGGTGAGTTT ATTGTCTACG TGTCAACCCA 
    TGAGAGCTCA NGTGAGCCGA NAGCAAGCTG GACCGGCCGT TTACTCTACC 
    GAGTTAAAAA CCGGGTTAAC CAGGCGGTTA ACACCGAGTG GTGTAGCTGA 
    TTTCAGCCCG GCGGTATCGC CTTCCGGAAA TTTAACGGCT GNGGCTTCAT 
    ACGGAGAGAG AGGCTGN

AT1G21680.1

Model type
Protein coding
Short Description
DPP6 N-terminal domain-like protein
Computational Description
DPP6 N-terminal domain-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40-like Beta Propeller (InterPro:IPR011659), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21670.1); Has 9463 Blast hits to 5353 proteins in 1263 species: Archae - 75; Bacteria - 6165; Metazoa - 47; Fungi - 60; Plants - 122; Viruses - 0; Other Eukaryotes - 2994 (source: NCBI BLink).
Link
InterPro Scan - TAIR