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13-4619-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3694480 [Map]; Strand: c
      • AT1G11070.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: Hydroxyproline-rich glycoprotein ...
        Distance: -832; Region: promoter
    Flanking Genome Sequence: 13-4619-1 - 5-prime edge 
    CTTAAATCGA TGGTCAAATA TAATAAAGTT ATGTATACGG TATATGATAA 
    TCTCTCTTTT GGGTAAGAAT GGAACATTCA TGCATTAATC ATCAGAAAAT 
    CTCTTCCCAA ATAAGATAGT AGGATTTCAT TCTTACCAAC CATATTTACT 
    TTTGTATTAG CATTATATTA TTATTATTCC CATTTGTTAT CTTAGAGATA 
    AGTTTGAACC ATTGACCCAT CAAATTATTA TTTTTTCATT CAGAAATATA 
    AATATATTAT CTTCTTTCTT TTGCCATCTT TCCCATTATG GATTAGGAAC 
    ATTTTACATT GTGAAAGAAA GAAAGCGTTA CACTTTTTTT TTGTTTTTTT 
    GTTACAGTAC TCTGATTTCA AGTAAAATAA TAATAATAAT ACTACACATA 
    CTTATTTTTT ATACTNGGAG CCTAAAATTT ACGGCCGCAC NAACGGAGNG 
    CACGTTNGCT TCTGTCACAT GTTNGTTTGT CCNAGTTTTT GCTCTTGCAT 
    ACTGCCGTNG TAAAAAGTNG GAAAGAAAAT AATCTTAACT TTTCAATTTC 
    AAATTAAAAA TGAATCAAAG AAATNGGAGC TTGACTTGTC TTTTTATANA 
    TATCCTCCTT TNACCTATTT NACTATACTC AATNCTTNTA TTTTTAGGAT 
    AANNANCCNG GGCCGNNGAC CCNCGGGCCC NNNNA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3694596 [Map]; Strand: c
      • AT1G11070.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: Hydroxyproline-rich glycoprotein ...
        Distance: -948; Region: promoter
    Flanking Genome Sequence: 13-4619-1 - 3-prime edge 
    GATTTAAGTA GCAAAAATCT ACGGTTACTA ATGAATTATA TAAAAGGGAG 
    AATTAACAAA AACCACCAAA AAAATGTGTG CGCCAAACTA GTCTGGGGTT 
    CCAATTTGGA TTTCATTATA ATGACATTGC ACCAAAAAGC TATTTATTTT 
    TCATTTGATC ATAATCTCAA AGCGGTGAAG GTTTTCTTTT GATCATTATG 
    ATCATGACAT AAAACGTAAC ATAAATCACA TATTCTCTCT TACAAGTTAC 
    AATCCTTGTT TTCCCCTATC TCGTGTGTCT GACAAGTTAA CGAAACAAAA 
    CCCAAAAATC TTTCAAAAAT ACTCATAATT AGATTACGTA CTAAATCATC 
    TTTTTAATCA TTGAATTTCT TCTCTACCGC GATGGCGGAG GAGGAACTCC 
    GCTGAGAAAC GCCGAGAAAA AGGCGAGAGA GCTGCTTGGT TTGAAGCAAG 
    GCACCGCATG TCCAGCTCCT CTGAACGTAG CAAACGTTAA ACCTTCGTAT 
    TCTTGAAGCC ACCCACTTAC CTGTTATAGC ATCATCAAGA ATTTAACCGG 
    TCTAACAATA CTCAAATCAA GAATTTCATA TAACTGGTGA ATTAGGTCCA 
    CGGGTACCTG TTTTTCATGG TACCATGGCC TCCAAGCTGT CTTGATGGGT 
    AATTCGAGTG CGTTTAAGCT ATAACGAGTC GCAAGTACTG GAACTCTTCC 
    GTCTGTGTCA CCACTGGATC ACCAN

AT1G11070.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: Hydroxyproline-rich glycoprotein family protein (TAIR:AT1G61080.1); Has 579 Blast hits to 567 proteins in 152 species: Archae - 0; Bacteria - 68; Metazoa - 159; Fungi - 113; Plants - 172; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).
Link
InterPro Scan - TAIR