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13-4635-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3729452 [Map]; Strand: c
      • AT1G11150.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 13-4635-1 - 5-prime edge 
    CCACGAGGAC CTGTTATATC GATCAATCTG CCCAACTGTG ACCAATTATC 
    AAACCAAAAA GAGGTTGAGC TGCCACTCTT AATTTCCACC TTGTGCATAG 
    TCTTGGCACA ATCTCTATAT TTGAATAGCT TTTTCCACAT CCAAGAACCC 
    ATATTGGAGC TCTCTTTAAC CAACCAGAAT GACCCTTTTC GTATGAGATA 
    TTTCCATATC CAAGTAACCC ACAAAGACTC TGATTTGGAT AGTATCCTCC 
    ATACCAATTT CAAACAACTA ACCTTGTTTG CCTCTACTAG TGATTTAATT 
    CCCAGCCCTC CCTCATTTAT TGGCTTACAA ATCTCGGTCC AAGCAATCTT 
    AGCTCTGTTG GGATTAAGAT CCGGTCCAGA CCACAGAAAA GCCGCACAAA 
    TCTTCTCAAT TTCCTTTAAA CAACTGTTTG GTAATCGATA AGCAGATATC 
    CAGAAGTTGG TGATACTTAC AAGTACTGAT TTGATGAGAG TAAGGCGGCC 
    TGCGTACGAT AGTGCTCTTG CAGTCCATGA GCTGATTTTT GATCTAACCT 
    TTTCTTTTTA TTATTCTTCT TATCTTTCTT CTCTTTCTCT TTCTTTGNGT 
    TGATGATGCA ATCACCACTC GATTCTCTGC CTCCTCCATC AATAATAGTA 
    TTGCCTCTAT CTCTCTNTNT GNTGAGCAAA TATTTATATC TNAAAGGGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3729524 [Map]; Strand: c
      • AT1G11150.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 13-4635-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG ATTTCATCTA 
    GGAGTCATTG ATTTGGGTAT TCCTCTCGAT GCAATGGTTG AAACAGCTCT 
    ACATCCTCGA CGGCGTCGAA AGCATCGAGT TGACGTTCTC AACAGAATTG 
    AAGCTGAGAT ACATACTACT CGCCAACGGA TCAGAATAAA TGAGAAGGAC 
    ATCTCGATGT GGAGATTTGT GGGAGATAAG TTTAAGACAA CTTTCTCAAC 
    AAAGTTCACT TGGAATAATA TTAGAGGCAC ACATCCAACG GTGGTTTGGT 
    CGAAAGGTGT ATGGTTCTCT TACTCTACGC CCAAATACTC ATTCTTAACG 
    TGGCTTCCAA TTCATAATAA ATTAGCAACA GGGGATCGAA TCAAGAAGTG 
    GAATACGGGG CAGCATGTAC ACTGTGTCTT ATGTACGAAC ACGGAGGAGA 
    CGAGAGATCA TTTGTTCTTC TCCTGCCCAT ACTCCTCAAC GATCTGGGAG 
    AACTTGGCAC ATCGCCTTCT TCAAACAAAC TACTCATCAA ATTGGCACCA 
    GCTCACCGCA ATGCTTCACA ACACAAGCAC TCCCCGGCTC CACCTCTTTC 
    TGCTTCGTTA TGTCTTTCAA GCTACTCTTT ACCATATATG CCGCGAGAGG 
    AATGCTAGAC GACACGGCGA GATACCTACC ACAACANTTC GACAAATCAA 
    GCT

AT1G11150.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
pseudogene, similar to putative AP endonuclease/reverse transcriptase, blastp match of 30% identity and 3.2e-59 P-value to GP|21952510|gb|AAM82604.1|AF525305_2|AF525305 putative AP endonuclease/reverse transcriptase {Brassica napus}
Link
InterPro Scan - TAIR