1. Home
  2. Mutant Lines
  3. 13-4668-1

13-4668-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage
Phenotype
sporophyte vegetative stage (PO:0007134)
  • decreased speed (PATO:0000304)
    (Flowering & Growth::slow growth)

seedling (PO:0008037)
  • abnormal (PATO:0000460)
    (Seedling::abnormal shape)

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 911532 [Map]; Strand: c
      • AT1G03650.1 - [+] show detail - Acyl-CoA N-acyltransferases (NAT) superfamily protein
        Distance: -339; Region: promoter
      • AT1G03660.1 - [+] show detail - Ankyrin-repeat containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-4668-1 - 5-prime edge
    CATCTGGGTG ATATTCCTCT GATACAGCAA GCTATGAAAC GAGCCATGGT 
    ACTTATCATG TTTGCTTTTT GGTCTATGGT TGTTGCATTT GCATTTGGAG
    TTTGTCTTGT ATTGATGCTC CTTCCATGGC ATTCCTTCCA TGTCTTTAGC
    TCCAAAGCAC ATAAGTGATG TGTATGTAGG TTTGTGAACA TTTTCCATTA
    CACATTCAAG CTCTTGATTG TTTCTATCTG CAATCTTTCA TAAGTTCGTT
    CACAGTGATT GATCAAATAT GTTGTCTTTT AATTTGGTGT GGTCTCTGAT
    ACAGTTCCTC TGTTTCTGGG GACTAAATTG TCACAAAAGT TAAATTTGTG
    GGTCAAATCA CAATTTCAAA TAGTTTCTAA AAGTCGTCCC CGCCGTCGCT
    ACGCACCTTC ATCAAAATCA AATCACAATT TCCTTGGCTC ACTCGCTCTC
    ACCGGCTGCG AAACCAACGA GAGATTCCAC AAAATCGAAT CTTTTGTACA
    ATGGACAAAG GAGTTGTGGT AGAGCTGATT AGAGGGTCGA CCAGTTGGGC
    CAAAGTTGTG GAAGATATCG TGAAGCTGGA GAAGAAAACG TTCCCTAAAC
    ACGAATCTCT CGCTCAAACT TTCGATGCAN AGCTGCGTAA GAAAAACGCC
    GGTTTGCTAT ACGTGGATGC TGAAGGANAC ACAGTAGGCT ATGCCATGTA
    TTCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 911648 [Map]; Strand: c
      • AT1G03650.1 - [+] show detail - Acyl-CoA N-acyltransferases (NAT) superfamily protein
        Distance: -455; Region: promoter
      • AT1G03660.1 - [+] show detail - Ankyrin-repeat containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-4668-1 - 3-prime edge
    CCCAGATGTT GTGGCCAAAT AAGATTCATT GTAGCTATGA CAGACAAGAG 
    CACTGGAATG CTATTGCAAA CCAGAAAAAC TATGAACACT GCTTTCTTGA
    CCAAACCTGT GATGCCTAAA TCTGGAGCAG AACTGGTGTA GATCTTTGTA
    AATGTGAAAC CCATAACAAA TGTCACAACT GCTACAATTG TTGTAACCAC
    CATAAGCAAT AAGATACGTT CTTGTAGTTT AGATATTCTG GGACGCTGTG
    AAGCACTCAA GAGAATTGGT TGTGTACCAT TTGGTGAACT AGCAGATCCC
    AAAGCCATAT CCAAGCT

AT1G03650.1

Model type
Protein coding
Short Description
Acyl-CoA N-acyltransferases (NAT) superfamily protein
Computational Description
Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 3295 Blast hits to 3295 proteins in 1287 species: Archae - 200; Bacteria - 2223; Metazoa - 217; Fungi - 220; Plants - 88; Viruses - 0; Other Eukaryotes - 347 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G03660.1

Model type
Protein coding
Short Description
Ankyrin-repeat containing protein
Computational Description
Ankyrin-repeat containing protein; BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT1G03670.1); Has 105 Blast hits to 104 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR