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13-4715-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4636351 [Map]; Strand: w
      • AT1G13540.1 - [+] show detail - Protein of unknown function (DUF1262)
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 13-4715-1 - 5-prime edge 
    CACTTCCAGA CGCTTCCCTG CAATGCAACC AAAATTTTAT AAACTTTTTC 
    AGGTTATATA AGAAGAAAGA TTCAAGAATT TCAGATTTGC GGATTAAACT 
    TCATACCCTG AATGCTTCCC ATGCCGTTTA ATAGCGTAAT AACAGTTTGA 
    AGATAGAGGC TTATCAAGAA CAGGAATGAA CACAACTGGG TCACGAGTGC 
    TGTCATCACC TCCAATATTG AATGTGACTG CTAGCTTAAG ATTTTGGGGC 
    AATGGCAAAC CACTTAGAGA AGAGTCCACA ACCAACCACG AGCCGAAGCA 
    AGATGTAGCC CGTGTCCGTG AGTGTTGGTC TTGGATTACC AAAATTCCAG 
    AATTTGGACC CTCAGGAGGA GGCTGTGTTA GCTCTGCTGG ATTCCTCCGG 
    TACTCTGAGA AACTCCTTGT GATGTACATT GTTTCACTAA ATCGAGTTTT 
    GGACTTGGAG AAAAACTTGA TCACNNNNCN NGGNGTAAAC CACTCTGNNC 
    ANCAGCANCT GACANGGTGA CTTGACTTTN CTGGATGGCT CGTTGNNNGA 
    AACTTCAAAG AAACTTACTT GATCTNCTTA AAGATCCTAN CCTACCCTAA 
    TTNNACCTNT NATNAAGNGN NNNTAANANA NGANNANCNA AGNNTTNNCC 
    TNTNTGNNTN NTGACNCCNN NNGNNTNNTG A

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4636235 [Map]; Strand: w
      • AT1G13540.1 - [+] show detail - Protein of unknown function (DUF1262)
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-4715-1 - 3-prime edge 
    TGGAAGTGCA AAAGAGGACG ATATAGTCTC CTGCTGCTTT TGCTCTAGTT 
    TTGTTCCTGA AGCCAAACCA AAACAGTTAG ATCCTTTTGA CATGTACCAA 
    CAATTCAAGA TCCATCAAAA GGAGCCTTCC TCGCGTTGTT ACTACGCAAC 
    ATCTGTCGCT CCTGACGGGG TCCCACCATG GTTTCTGAGG AAAAAAGAGT 
    GGACGGTTGA ATACTCGAGG TTCCAAGACT TTGAACTGAG AGATGATGCA 
    AAAGGACTCA TCACAGAGCT TCGTACTGAG CTTCCTCTTC TTGGTATGAG 
    CACTGTGGTT GGGAAGTGGT ATGTCCCTTT CATATTCGTG AAAGAAAGAG 
    AGGTAAAGGA TCAGATCAAG AATT

AT1G13540.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1262)
Computational Description
Protein of unknown function (DUF1262); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1262 (InterPro:IPR010683); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1262) (TAIR:AT1G13510.1); Has 101 Blast hits to 94 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR