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13-4783-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4835814 [Map]; Strand: w
      • AT1G14120.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
        Distance: -725; Region: promoter
      • AT1G14130.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
        Distance: 0; Region: exon3 (3UTR)
    Flanking Genome Sequence: 13-4783-1 - 5-prime edge
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTA GTAACTAAAT ATGATTTTGA TAAAAAAAAA
    TTTCTCTAGA AGTACCACCA ACAAACAGAG GATCAATAGT AGTAGTATTG
    CATCCACAAA GATCTCAAGG TAAAAAAGAT CATATATTGC AACAATCCAA
    TAGGTAATAC ATTTTAATAC ATCTTTATTT CTCATTCTTA GGTAANAAAT
    TGCTGTTTTC TGGCTCCATA GCGCTACCAT CTTAAAATGC CATTTAGGTC
    ATTTATCTAG TCCTGCATGG GTTATAAGCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4835791 [Map]; Strand: w
      • AT1G14120.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
        Distance: -702; Region: promoter
      • AT1G14130.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
        Distance: 0; Region: exon3 (3UTR)
    Flanking Genome Sequence: 13-4783-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCA TTATGGAGTT AATTCTGTTT 
    TTATAGTTCT AAAGCTCTGT TTTTCTTTGC TTCCAAGTTT CAAAATATTC
    TACTAAAGGT TGCTTATAAT GTACCATATT TTTTGATCGA ATAAAATTTT
    ACATTCTCTC AAGAAAAAGA AAATTACTAT ATAGTTAATT AAAGATGGAG
    TCCGGAAGTA AACAGCCTGG TTTGGTCCCA AATCGCCACT TGTACTTGAT
    CCTGAGCCTT ATCTCCAAAC CATTGGTAGA TTGATCTACG TGGCCAGTAA
    CAAGAACTAA TTTTTGCATA TTGTGTGTAT GTGTTGGCAC AAATTATGCA
    AGAACCATCG GCGTGCAGCT TTAAGAGTAG TTGGATATCT AAAATGCATA
    GGAGGCAGAT GCACCTTCCT TGGTGGCTCT AGATCCGGCC CATGACGCCA
    CATGTATCTC AAACCGCTAA GAGGTGGCGT TGCGTTGTCT TCTTATATCT
    TTCAAAAACA AAGGAACCAA TATCTTTCAT TTTTGTTTTA CCGGTTGACT
    CTAATAGTTG CATCCCTATG CAAATTCGTA TTTGCATGTA TGATGTATCT
    ATATGATGTT AACACAAAGG AACCACATTA TGCCCGTAGT GTCACATTCA
    CGTGGAAAGC GTGGAGAGTA TTTTATTAAT TACTACGGCA GACTTCTGTG
    CATGGTCGAA AATACTTCGA CTTCTTTATA TAATAATCTC NCCCTTCNAT
    AAGTCATCTT ACAATACATT NACTCCTTCG TTTT

AT1G14120.1

Model type
Protein coding
Short Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Computational Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G14130.1); Has 6316 Blast hits to 6255 proteins in 769 species: Archae - 0; Bacteria - 698; Metazoa - 67; Fungi - 416; Plants - 4549; Viruses - 0; Other Eukaryotes - 586 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G14130.1

Model type
Protein coding
Short Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Computational Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G14120.1); Has 6919 Blast hits to 6851 proteins in 822 species: Archae - 0; Bacteria - 798; Metazoa - 89; Fungi - 567; Plants - 4661; Viruses - 0; Other Eukaryotes - 804 (source: NCBI BLink).
Link
InterPro Scan - TAIR