Home
Mutant Lines
13-4917-1

13-4917-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 1118584 [Map]; Strand: w
- AT4G02540.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
  Distance: 0; Region: exon1 (CDS)
- AT4G02540.2 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
  Distance: 0; Region: exon1 (CDS)

AGCTTACCAC GTGTCATAAA GATATCTCGT CATCCCCATC GTATCTCGTT 
TACTCCTTCT TTTGATCTTG AAGAATATTG GTCTTGTGGT GTTTGTCGCA 
GAAAGATCGA CAATGATTAT GGGTGCTATT CTTGCGTCAA GGACGGCTGT 
TCCTATGCGG CTCATTCAAA ATGTGCCACA CAGACCAATG TGTGGGATGG 
TAAAGAACTT GAAGGAGAGC CAGAAGAAGA CATTGAAGAA GTTGAGCCGT 
TTGTGACGAT AAGCAATGGA ATTATACAGC ATTTCAGTCA TGAGCATCAT 
CATATGAGAC TTGATGTGAA CACAGACAGA GATTACGATG AGAATAAGTT 
GTGTCAAGCA TGCATCACAC CAATCTATTT TGGTAACTTC TTCTCCTGTA 
TGCAATGTGA TTTCATTCTA CACGAGGAAT GTGCAAAATT TCGTCGTAAA 
ATACATCACC CGACACATCC ACATCTGCTC ACTCTATCGA GAGAACTCGA 
AGATGACGAT CAGCGGTTTT GGTGTTCAGC TTGTTCTTCG AAGGGCATTT 
TTGGTTTCTT CTATGAGTGC AGTGAAGAAG GATGTTATTT TGACCTACAT 
GTGCAGTGTG CCACAATTTC TGAGCCGTTA GTCCATGAAA GTCATGTGCA 
TCCTTTATTT CTACATNCAA CCNGAAGAGA AGAGAANAAC ATGTG

3 prime edge [+] show sequence

Chromosome: 4; Position: 1118447 [Map]; Strand: w
- AT4G02540.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
  Distance: 0; Region: exon1 (CDS)
- AT4G02540.2 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
  Distance: 0; Region: exon1 (CDS)

GGTAAGCTGA AACACTTTTG ATGGATAACA AAGTCACAAG GGGGACATGT 
GTAGAAAGGA CAGCTTGAAT GTGTCAAGCC ACAGACGCTG CAAGGAAACG 
GAGTCTGTGT TGGAAACAGA GCAAGAGTAT GTTCATGCCA CTTGGTAAGG 
TGCATAGACA AGTCTGGTGG TTTCTGCACA CAAGCAAAAT TAACAGCAAA 
ATCGCAAGCG GAGCAATAAT AAAAGATCTT TATGANATCC TCCTCGCAGC 
AATAGCATTT CCTCGTGCTA CTAACCAGTT TCAAGGAACN AGGAAAAAAA 
ATGTTTAGGA TNAAAANGGG TTTGATCCAA CTGGANCCTG GTTNAANCTT 
TTGGGTNCCN CCTTTGNACC TTGGGAAAAA AANGGGAAGG GGTTTCCCCC 
TTGGNACCNA ANTTTCCCCC TTTTANNGGA AACCCCCCCT TCNCCCCCCC 
AGGTTTTNGC CCCCNAAAAA NNNNNNTTTT NNNNNNNTTT TTNNGGGGGG 
GNNNAAAAAA ANNCCCCCCN TTTTTNNNGN NAAAAAAAAA NNNNTTNNNG 
GGGNNNNNT

AT4G02540.1

Model type: Protein coding
Short Description: Cysteine/Histidine-rich C1 domain family protein
Computational Description: Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G48320.1); Has 1656 Blast hits to 645 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 1; Plants - 1649; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G02540.2

Model type: Protein coding
Short Description: Cysteine/Histidine-rich C1 domain family protein
Computational Description: Cysteine/Histidine-rich C1 domain family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT1G62030.1).
Link: InterPro Scan - TAIR