1. Home
  2. Mutant Lines
  3. 13-4918-1

13-4918-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30352051 [Map]; Strand: c
      • AT1G80760.1 - [+] show detail - NOD26-like intrinsic protein 6;1
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 13-4918-1 - 5-prime edge 
    TAAATACCGT ACCCTACGCA TCCCTTAGTT CTACATCACA TAAAAACAAT 
    CATAGCAAAA ACATATATCC TCAAATTAAT TAGATCTCAT CTATCTCTAC 
    CCTCGACATG GATCATGAGG AAATTCCATC CACGCCCTCA ACGCCGGCGA 
    CAACCCCGGG GACTCCAGGA GCGCCGCTCT TTGGAGGATT CGAAGGGAAG 
    AGGAATGGAC ACAATGGTAG ATACACACCA AAGTCACTTC TCAAAAGCTG 
    CAAATGTTTC AGTGTTGACA ATGAATGGGC TCTTGAAGAT GGAAGACTCC 
    CTCCGGTCAC TTGCTCTCTC CCTCCCCCTA ACGTTTCCCT CTACCGCAAG 
    GTACATATGT ACACATTCTC ATTACAAGTA CACTCCATAT AAATCATGTT 
    TCCAATTCAC TGAGCATTGA ACCAATACAT ATATGTACTN GNANAGTTGG 
    GGAGCANAGT TTGTTGGGAC ATTGATCCTG ATATTCGCCG GAACAGCGAC 
    GGCGATCGTG AACCANAAGA CAGATGGAGC TGANACGCTT ATTGGTTGCG 
    CCGCCTCGGC TGGTTTGGCG GTTATGATCG TTATATTATC NACCGGNCAC 
    ATNTNCGGGG CACATNTNAA TCCGGCTGNA ACCATNGCCT TTGCTGNTNT 
    NAAACACTTN CCTTGGAAAC ACNTNNNNNC TTTAN

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30352167 [Map]; Strand: c
      • AT1G80760.1 - [+] show detail - NOD26-like intrinsic protein 6;1
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 13-4918-1 - 3-prime edge 
    GGTATTTATA GAGGAAGGCA TGAGAGTTGA CTTATGAGTG AAGGACCCAA 
    AATAGATGAT TGATATTTGG TTGGAGTGAG GAGTAAGTGG GTTGGTAATC 
    CTTAGTTTTA ATGCATGTGT CCTAAGGAAG ACTCTTTACA TAACATGAAA 
    TGTTGCTATC TTTATGAGAA TGGGTCGTGT ATTGTATCTT TCATATTTCT 
    ATTTACATGA TACATGTATC GTGTACTAAA GAAGCT

AT1G80760.1

Model type
Protein coding
Short Description
NOD26-like intrinsic protein 6;1
Curator Summary
Encodes a protein with boron transporter activity. It helps to preferentially direct boron to young developing tissues in the shoot, such as immature leaves, under low boron conditions. This boron channel appears to be impermeable to water, unlike the closely related NIP5;1 boron transporter. This protein also allows the transport of glycerol, urea, and formimide but not larger uncharged solutes such as arabitol and sucrose when it is expressed heterologously.
Computational Description
NOD26-like intrinsic protein 6;1 (NIP6;1); CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 5;1 (TAIR:AT4G10380.1); Has 10266 Blast hits to 10221 proteins in 2131 species: Archae - 103; Bacteria - 5136; Metazoa - 1354; Fungi - 440; Plants - 2031; Viruses - 2; Other Eukaryotes - 1200 (source: NCBI BLink).
Link
InterPro Scan - TAIR