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13-4952-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1432212 [Map]; Strand: w
      • AT1G05010.1 - [+] show detail - ethylene-forming enzyme
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 13-4952-1 - 5-prime edge 
    CTGTAGAAAG ACAATAACAC CGGTTAAACT TTTACTTAAA CCCAAAAGAA 
    AAAAACCGGT TCATGCTGAG TTGTTTTGAA AACCAGTAAA TCTGAGATCC 
    TGTAACCGGT TAAGGTAAAA AACGGACCGG TATGAAACTA AAAAAGGTTA 
    CCTGTAATCG TCGTCGAGAT CAGGGACATC GGCGATATTA GAGACGGGAA 
    GGTGCTTGAG GTAGAAAGTG GATTCCCAGT CAACGTCGTT GACTTCAGAG 
    CGAAGAGAGT CAAGACCTCT GTTCTTAATC GATTCCTTGA ATCTCTCTTC 
    CATGCACTTC TTGTAATGTT CCTTGGTCAT CTTCTCCACT TTGTCCAAAA 
    GCTCGAGTGA AATCCCATGG TTCACACACT GTAATATCAC AAACAGATGA 
    TTAGATTTTG AGTTACACAA TTTTATAGAA GAAAAGAAAA GTGAGAGTAC 
    CTCAAAGAAG CCCCAGTTTT CACAAGCGTC TTTGATCTTC TCCATAGTGA 
    TTGCTCTCTC TTCTCCATTA AGCT

AT1G05010.1

Model type
Protein coding
Short Description
ethylene-forming enzyme
Curator Summary
Encodes 1-aminocyclopropane-1-carboxylate oxidase
Computational Description
ethylene-forming enzyme (EFE); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate oxidase activity; INVOLVED IN: response to fungus, ethylene biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G12010.1); Has 8587 Blast hits to 8552 proteins in 1009 species: Archae - 0; Bacteria - 1142; Metazoa - 103; Fungi - 1035; Plants - 4924; Viruses - 0; Other Eukaryotes - 1383 (source: NCBI BLink).
Link
InterPro Scan - TAIR