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13-4991-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 439087 [Map]; Strand: c
      • AT1G02250.1 - [+] show detail - NAC domain containing protein 5
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-4991-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    ATGCATAGCC CAATCGGACT TGGAACCACC GTGATTCTTA AACACCAAAA 
    CCCTTTTCTC ACCGATCTTC TCACGATCTC CCGTTTTGCG CATTATATCC 
    ATGGTAACGC CAGTTTTCTT CCAAAAACCA GACTTGGTTT TTCTTATCTG 
    TCGATCACCT TTACCATATT TGTTCTCCTT ACGGCCGAAG AAATACCAAA 
    CCTGATCTCT TGTTTTCATC CTAGAATGGG CTGGGAAAGA CAGAACATGA 
    TCAGAAATTA CCGGGATGAT ACAACAGTTG GGAACCAAAG AAAAACAAAC 
    ACTCGTGTTA GAAAGACTTA CAAGGTAAGT CCCAAGGGTC GAAGCTACAG 
    ATATCAACTG TGCTAATGAC TTCATCGACA TGGCTACCGT CNCNGNCCNG 
    ATNNNNCGNG NGGGNNGTNA ATGTCGACGA TCTCCCCGTC AGTCGGACGG 
    AATCTAAAAC CCACCGGATT CGCCATTTTT TCAACAGCTA CAAAAAGGTT 
    CAGATCAAAA CTAAGAGAGG GAAAGATATC AAATTATGAA GTANAGAGCT 
    TTCTCTATGG TCGCTCTTCG CCCGCTCGTC TACAAGTTTA TATCATAAGA 
    GCAAGTCCAA CAAAGGGATT TAAAGCATAT CTTAACTGTT GAGAACCAAA 
    TTTAAAAAAC TACCGGTGGT CATGCTCTAA NCAGGCAANA TGGGTTTGNG 
    CGCTTATATA AGGCACA

AT1G02250.1

Model type
Protein coding
Short Description
NAC domain containing protein 5
Computational Description
NAC domain containing protein 5 (NAC005); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: xylem; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 4 (TAIR:AT1G02230.1); Has 2682 Blast hits to 2674 proteins in 69 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2682; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR