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13-4993-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1065359 [Map]; Strand: c
      • AT4G02420.1 - [+] show detail - Concanavalin A-like lectin protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-4993-1 - 5-prime edge 
    ATCATGAAGA GGAGGAGAAA GTTCGCTGAG GAGGTGGAAG ATTGGGAAAC 
    AGAGTTCGGG AAGAACCGAC TAAGGTTCAA GGACTTGTAC TATGCAACAA 
    AAGGGTTCAA GGATAAGAAC ATTCTTGGAT CAGGCNGGGT TCGGGAGTGT 
    TTACAAAGGT ATCATGCCCA AGACGAAGAA GGAGATTGCC GTGAAAAGAG 
    TCTCGAACGA ATCTAGACAA GGTCTGAAAG AGTTTGTGGC TGAGATCGTG 
    AGTATTGGAC AGATGAGTCA CCGGAACTTG GTTCCTCTCG TGGGTTATTG 
    CCGCCGGAGA GACGAGCTTC TTTTGGTGTA CGATTACATG CCCAATGGAA 
    GTTTAGACAA GTATTTGTAC AATAGTCCAG AGGTAACCCT TGATTGGAAA 
    CAGAGGTTTA AAGTCATTAA TGGCGTGGCC TCTGCCTTAT TTTATCTCCA 
    CGAGGAGTGG GAACAAGTGG TGATTCACCG CGACGTCAAA GCTAGCAACG 
    TCTTGTTAGA CGCGGAGCTC AATGGAAGAC TCGGGGATTT CGGTTTAGCT 
    CAGTTGTGTG ATCACGGGTC AGATCCTCAA ACTACNCGTG TAGTTGGTAC 
    GTGGGGATAC CTAGCCCCCG ATCATATCAG GACAGGACGC NCCACGACCA 
    CTACTGATGT GTTTGCATTT GGGGTGCTCC TACTANAANT GGCGTGC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1065475 [Map]; Strand: c
      • AT4G02420.1 - [+] show detail - Concanavalin A-like lectin protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-4993-1 - 3-prime edge 
    TTCATGATGA AGCGTACGAG GAAGATTATA AGCAAGAAGG GAATCAACAA 
    GAGGGAGATC AACGGCACCC AGTTCTTGTA GAATCTGTAG ACTCTTGTAG 
    GTTCTAAGTC CCACACCGGC AATCTCGGAA GCT

AT4G02420.1

Model type
Protein coding
Short Description
Concanavalin A-like lectin protein kinase family protein
Computational Description
Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT4G02410.1); Has 115117 Blast hits to 113792 proteins in 4484 species: Archae - 103; Bacteria - 12860; Metazoa - 42338; Fungi - 9449; Plants - 33733; Viruses - 419; Other Eukaryotes - 16215 (source: NCBI BLink).
Link
InterPro Scan - TAIR