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13-5028-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2443704 [Map]; Strand: c
      • AT1G07900.1 - [+] show detail - LOB domain-containing protein 1
        Distance: 72; Region: intergenic
      • AT1G07901.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 267; Region: intergenic
    Flanking Genome Sequence: 13-5028-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT TGTGTATGCT AACTAACCCT GAGTAAAGTT 
    CTAGAGAGGG CCTTAAAGCG AAGTAGTCAA AATCTTAGTA ATGATCAACA 
    TGTCCAAAGA GGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2443713 [Map]; Strand: c
      • AT1G07900.1 - [+] show detail - LOB domain-containing protein 1
        Distance: 81; Region: intergenic
      • AT1G07901.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 258; Region: intergenic
    Flanking Genome Sequence: 13-5028-1 - 3-prime edge 
    ATTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
    AACATTGTAC GGTGAATAAA GAAAAGTAGA GGCGGCTTTT TTAAATTGTT 
    TTTTTGACCG GGTTTTCAAT GTTTTTTCCT GCGGTTTTTA GACACAAACC 
    GGAAAGTATA CCGGATCTAA ACAACCGCAG AGCGAAAAAA AAAAATNTAA 
    AACTAANCNA CGTCNTTCGG CTNTTTNTNT TGTCNCCCTC CTCAGGCNAC 
    GGNNACAATA AACCTCCGTT CCAAATNTTC CCGTNTNTTT TNTNAAACCC 
    NACCGACTNT TCANGGCCCA AAAAAAAAAA AAATANTCGG NGGGATAGGG 
    GTNTNTTTGT AATTTGGCAA ACAAATCCCC ATCATANCTT TNTTCCTTAC 
    TTCNTTCNCC CTACCCGNTT TACTNTTTTG CNTTNTNTCC NAGGTAAGCT 
    NCCANCCCGG GCCGTAAACC NCCCNTGCCC CTNTA

AT1G07900.1

Model type
Protein coding
Short Description
LOB domain-containing protein 1
Computational Description
LOB domain-containing protein 1 (LBD1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1035 Blast hits to 1030 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1035; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G07901.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR