Home
Mutant Lines
13-5034-1

13-5034-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 6308287 [Map]; Strand: w
- AT1G18330.1 - [+] show detail - Homeodomain-like superfamily protein
  Distance: -274; Region: promoter
- AT1G18330.2 - [+] show detail - Homeodomain-like superfamily protein
  Distance: -277; Region: promoter

TGTTTCTCTA ATCCGTAAAG AAAAAGATTC TGTGGATAAA AAATGTGAAA 
CGTTAGCAAA TTATGAAGAA GATATTTTTT TGTGATTATT TGGAAGATAT 
CCTTTTTTTG TGTGTTTCCG ATCCGTCTCT GACTTCCACN TTGCTTTCGT 
GATATTACTC TTTGCCGGTT TGCCCCCAAA AAGGCCAAAA CTAGTCTCAT 
TGTTCAGTTT TGTAAGTTGT AACCTTCGAT TTTTGTAAAG GGAAAAATAC 
ATTATTCTTG AGTTAAAAAA ATCACTTGAT TAATTAGATG ATTTGATACT 
TGAGTAATTG ATATGTATTA TGTAGTAATT CGATTTCAAA ATATCTCTTT 
AGTCTTATAA AACTGTATGA AAGAAAAGTT CATGACAAAA GATTATAAAA 
TGGTTGGGAT AATGGGCAAA TCAAGTCGCA TCACATGGTG TCGGATGTGA 
CAACTATATT TCTTAATCAC ACAAACTATT AGAGCCACAA TTTTGATACG 
GACAGATCAC CCCATTCCTC TCTTTATTAT TATCTTTTTG TTTCATTTTT 
GATATATACA TTATATGTTT TAAATTAAAA TGATCGCTTT CTGACCCCAA 
ACTTTGAAAA AAGACAAGAT TNTTNNCTCA ATTTATTATA TGATAATGAG 
GTCCTTAAGT CCTTNTATGN TACGCNATNN ANATTCTATC CNANATTTAG 
NCT

3 prime edge [+] show sequence

Chromosome: 1; Position: 6308208 [Map]; Strand: w
- AT1G18330.1 - [+] show detail - Homeodomain-like superfamily protein
  Distance: -195; Region: promoter
- AT1G18330.2 - [+] show detail - Homeodomain-like superfamily protein
  Distance: -198; Region: promoter

ATTGAAAACG GNAGAGGTAT TTTACCGACC GTTACCGACC GTTTAGATCA 
GATTCTTTGA AGAAGACACA GCGCGTGGTG TACACTAGCG AGAGTGAGTG 
TTAGCTTTGT TCTGAGCCAC AAGATATCTC TCTCTCAGTG TCAACCTTCT 
CGAAATTTCC ATGAACATTA AATAATGATA AAAATCTGAA TCTGACGTGG 
CACATCTCTG CTATTTAATA TAAAAAATTG GTCACTTGCT ATTTCTAGTA 
CCTTCTTTCT TTCTTCACTC TCTCCTGTCT CCTCTTCTCA CTGTTTCCTA 
TTTCGTAATT TTCTCGAGAA ATCGTCTTTT CTTGTTTACG CTAATTTGAT 
TTCTCGAGAA AAAAAAANGG ANNCNNAAAA ANATNCTTAT TTNATCTTNN 
CNCNGTNCAA AAATCTTCGG GGGACGGATA ACTTGCAAAG TNCTNATNGA 
GGTTTCTTTT TCTTTNCCCN GNTGCCTCTG GNATCTGGGT TCTTNNNGGG 
CGGNCTNTNC AAAAAACNGN TTCGGGGAAA TNAATNAGCT TANNGCNCTG 
TTTNGTNCCC NTTTCAGGCT GGTTTTTGGG ANAATAATCN GNGCGGNANA 
GAANANCGTG TNAAANNTTT TTTNAANGGG CCCGNTGNAG GNAATACATN 
GNCNGAGANA TNGANNAATN NANAACNNGN NAGNGACCCT TNTGNAAGAN 
ANNGGATNCC TTGTGAANGA GNAGCNCNCT NTNTCTNGGN AAAAACTTNG 
ANANAAANNN CGANNGAATN NAANTNNGTN GTGNCANCTT N

AT1G18330.1

Model type: Protein coding
Short Description: Homeodomain-like superfamily protein
Curator Summary: EARLY-PHYTOCHROME-RESPONSIVE1
Computational Description: EARLY-PHYTOCHROME-RESPONSIVE1 (EPR1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G10113.1); Has 1461 Blast hits to 1443 proteins in 140 species: Archae - 0; Bacteria - 0; Metazoa - 102; Fungi - 30; Plants - 1113; Viruses - 0; Other Eukaryotes - 216 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G18330.2

Model type: Protein coding
Short Description: Homeodomain-like superfamily protein
Curator Summary: EARLY-PHYTOCHROME-RESPONSIVE1
Computational Description: EARLY-PHYTOCHROME-RESPONSIVE1 (EPR1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G10113.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR