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13-5062-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3729635 [Map]; Strand: c
      • AT1G11150.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 13-5062-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCG ATTGTATCTC AGCTTCAATT CTGTTGAGAA 
    CGTCAACTCG ATGCTTTCGA CGCCGTCGAG GATGTAGAGC TGTTTCAACC 
    ATTGCATCGA GAGGAATACC CAAATCAATG ACTCCACNGA GGACCTGTTA 
    TATCGATCAA TCTGCCCAAC TGTGACCAAT TATCAAACCA AAAAGAGGTT 
    GAGCTGCCAC TCTTAATTTC CACCTTGTGC ATAGTCTTGG CACAATCTCT 
    ATATTTGAAT AGCTTTTTCC ACATCCAAGA ACCCATATTG GAGCTCTCTT 
    TAACCAACCA GAATGACCCT TTTCGTATGA GATATTTCCA TATCCAAGTA 
    ACCCACAAAG ACTCTGATTT GGATAGTATC CTCCATACCA ATTTCAAACA 
    ACTAACCTTG TTTGCCTCTA CTAGTGATTT AATTCCCAGC CCTCCCTCAT 
    TTATTGGCTT ACAAATCTCG GTCCAAGCAA TCTTAGCTCT GTTGGGATTA 
    AGATCCGGTC CAGACCACAG AAAAGCCGCA CAAATCTTCT CAATTTCCTT 
    TAAACAACTG TTTGGTAATC GATAAGCAGA TATCCAGAAG TTGGTGATAC 
    TTACAAGTAC TGATTTGATG AGAGTAAGGC GGCCTGCGTA CGATAGTGCT 
    CTTGCAGTCC ATGANCTGAT TTTTGATCTA ACCTTTNCTT TTNATTATNC 
    NNCTNATCTT TCTTNTNTTT

AT1G11150.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
pseudogene, similar to putative AP endonuclease/reverse transcriptase, blastp match of 30% identity and 3.2e-59 P-value to GP|21952510|gb|AAM82604.1|AF525305_2|AF525305 putative AP endonuclease/reverse transcriptase {Brassica napus}
Link
InterPro Scan - TAIR