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Mutant Lines
13-5070-1

13-5070-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 806297 [Map]; Strand: w
  - AT2G02820.2 - [+] show detail - myb domain protein 88
    Distance: 0; Region: exon6 (CDS)
  - AT2G02820.1 - [+] show detail - myb domain protein 88
    Distance: 0; Region: exon6 (CDS)
Flanking Genome Sequence: 13-5070-1 - 5-prime edge
```
TCTGAGTTAA CACAACAAGC AATCCTGTTC TCTTTCGCCA TAGCTTCATG 
CTTAGCCCTC TTCTTGCACA GTGTAGTAAA CCTGTTCTTC ACAGCATTAT 
CCGTTCTACA CAAACAATAC AGAACAAAGA ATGAATT
```

3 prime edge [+] show sequence

Chromosome: 2; Position: 781448 [Map]; Strand: w
- AT2G02770.1 - [+] show detail - 4'-phosphopantetheinyl transferase superfamily
  Distance: -1662; Region: intergenic
- AT2G02780.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
  Distance: 399; Region: intergenic

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATAAA 
CTTCCTTTGT TATGACTTGT ATCGCTAGCT AAAAACAAGT GCTTGTGTTC 
CACATAACTA TAATAACCAT AGCTATACCC AGGTTAGGTA AGATGTCGAA 
AACAGCAAGT GGCTTTGCCA AGTTACCTCA CCTAGCATAC ATACTACTGA 
TCAATGCATT TTCGCTCACA AAACAAATTT TGTTACAATA CCATTGGCTT 
TTACTAGCTT CTTACTTCTT GACCAATCTC TTGAGCCTCC AAGATAGATA 
GGCACAAGAA GACAGGATCA TGACAAACGC TCGATGATCA CAAACACATA 
CACACCAGCT TCCTTCATTC GAGTTTGATA TGTGAGCTCT CGTAGACGCA 
CGTTCCATGG CGTCGAGAAG CC

AT2G02770.1

Model type: Protein coding
Short Description: 4'-phosphopantetheinyl transferase superfamily
Computational Description: 4'-phosphopantetheinyl transferase superfamily; FUNCTIONS IN: holo-[acyl-carrier-protein] synthase activity, magnesium ion binding; INVOLVED IN: macromolecule biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: 4'-phosphopantetheinyl transferase (InterPro:IPR008278); BEST Arabidopsis thaliana protein match is: 4'-phosphopantetheinyl transferase superfamily (TAIR:AT3G11470.1); Has 1867 Blast hits to 1863 proteins in 711 species: Archae - 4; Bacteria - 1515; Metazoa - 102; Fungi - 36; Plants - 117; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G02780.1

Model type: Protein coding
Short Description: Leucine-rich repeat protein kinase family protein
Computational Description: Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G14390.1); Has 90498 Blast hits to 51050 proteins in 1587 species: Archae - 36; Bacteria - 4349; Metazoa - 18583; Fungi - 1583; Plants - 60249; Viruses - 102; Other Eukaryotes - 5596 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G02820.1

Model type: Protein coding
Short Description: myb domain protein 88
Curator Summary: Encodes a putative transcription factor (MYB88), involved in stomata development, double loss of MYB88 and FLP (MYB124) activity results in a failure of guard mother cells (GMCs) to adopt the guard cell fate, thus they continue to divide resulting in abnormal stomata consisting of clusters of numerous guard cell-like cells. This phenotype is enhanced in double mutants over the single mutant flp phenotype.
Computational Description: myb domain protein 88 (MYB88); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G14350.2); Has 8359 Blast hits to 7654 proteins in 549 species: Archae - 0; Bacteria - 2; Metazoa - 785; Fungi - 539; Plants - 5060; Viruses - 3; Other Eukaryotes - 1970 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G02820.2

Model type: Protein coding
Short Description: myb domain protein 88
Curator Summary: Encodes a putative transcription factor (MYB88), involved in stomata development, double loss of MYB88 and FLP (MYB124) activity results in a failure of guard mother cells (GMCs) to adopt the guard cell fate, thus they continue to divide resulting in abnormal stomata consisting of clusters of numerous guard cell-like cells. This phenotype is enhanced in double mutants over the single mutant flp phenotype.
Computational Description: myb domain protein 88 (MYB88); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G14350.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR