1. Home
  2. Mutant Lines
  3. 13-5113-1

13-5113-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 10984850 [Map]; Strand: c
      • AT1G30850.1 - [+] show detail - root hair specific 4
        Distance: -228; Region: promoter
    Flanking Genome Sequence: 13-5113-1 - 5-prime edge 
    GATAAACTAA CAAAATCGGT TATACGATAA CGGTCGGTAC GGGATTTTCA 
    ATTTTAAGGA AAAAATATAA GGTTTGATTT TTCAATTTTA GGATGTTAGA 
    TGGGGACCGA TGAAATGGTT TGCACGTAGT TTGTGACCTT ATCATTCTGA 
    CTTTTGAGTT TAGTAAGCAG TTTGTGTGTG TGTATGTGTT CCTCTGCCTT 
    TTCTATAGGT AAGTCAACAC TTTTGTGACA TGTGGAATTA GTTCTACTTA 
    CGAAAAGGAT TCGAAATTAC TAGCCAAGAA ACATTCGAAA TAGTACAAAG 
    TCACATGTGA ACATGGTACA TCGAACTTGA TTCTCATTTT ATCTGAAAAA 
    TCAAACACTT CATAAACCTA CAAAAGGTTT AAGAAAGTAT TGCGCATTTT 
    CCTTCTCCTT AGACAAAACA ATAAGTATTA AACCTTCTGT GCTTTTTTGG 
    CGTTCTANAA TCCCGGAAAC TGTGTTAACC AATAAGAGAA TGCAATTGTG 
    CAAATGTTGA CAAGCGGTTC TTTGAAACGT TCCACAAACG TCCAAATCAA 
    CAAATGTTTA ACAAAAATTC CATGTTCACA GTAGAAAAAC TAACATGAAA 
    CTAAATAATA CAAACAATAA TTTAGTTATA TTTGGCGTTG AGAGTTTCAG 
    GAGACAACAC ACTTTAACCA GAAATAAGAT TACCACACAC ATTTTTACAA 
    AAACAAANCN AAAAAAAGGA ANAANAGAGC AGAGAGGAAA ATGTCCTCCT 
    TTGCTGCTCT TAC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 10984921 [Map]; Strand: c
      • AT1G30850.1 - [+] show detail - root hair specific 4
        Distance: -157; Region: promoter
    Flanking Genome Sequence: 13-5113-1 - 3-prime edge 
    ATTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCA 
    TGATAGTAAC CACATGTCAA AATCTTAGGA CAAAGATAGA ACCGACATGT 
    AAGTCACTAC TTTTGCCATG AACGTGCTTA CCATTTTCTT TTATATTCCT 
    ACTACTTATA TCTCTATCCT CTCCATATTT TTTACCCGTA AAATTATAAA 
    CCCATTTTCA AAATCTGATC TTTTTTTTTT CGTNGACAAA TNTAGTTATG 
    CCTCCTCCGG CAANGCTNGC GTTNGACNAN GGTTNACCCC GGAAATCTAN 
    CNATAATGAG NGGCANGGTT TCANAGTTTT TCCAGGANAA AATACTANCC 
    CTANCCCTAA TNTAAATTTN TNGGTTAAAA AGGCAATTNT GCAAAACNAN 
    AAATCAATCN CTCCTNTTTT NTCCCGTTCG TCGGCAANAN ATNATAGCTT 
    CAAAATNGNG TNGCCGCCGG CGTNGCCTCC TCCTAAANAC TCCACCGTTC 
    CGNTTCCTNT GCTTCCGGAN CCGATNAAAG TCCGGAAAAA GCT

AT1G30850.1

Model type
Protein coding
Short Description
root hair specific 4
Computational Description
root hair specific 4 (RSH4); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34910.1); Has 45 Blast hits to 43 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR