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13-5133-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22849179 [Map]; Strand: c
      • AT3G61730.1 - [+] show detail - reduced male fertility
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: 13-5133-1 - 5-prime edge 
    GTTACAATCC ANGGGTTCAT GTCTTATCAA CGACATCAAA AGCGGTATNT 
    GGATTGCAGG TAAGAACAAT NNCTTTAGAA ACTTTATCTA CTGCAGAAAA 
    AGAAAACTGT ANCATGGCCT TATCTCATGT TCCAGATTTA CAGCTTGTAC 
    GTTGCCCTGT TTGTGACCTC AGTACCTGTG ATGGTAAAAG ACACTAATCA 
    ACTTCTAGTC TGTTTCTATT GATGTTAGTC TATGAAATAA CTAAATTGCA 
    ACTAAGAGAG TTTCTGTTTT ACTATGTATA GGAACAATGC AAACTCTTGA 
    TGCTAGGCAC ATTGAACTCT TCCTTAGTGA AGGCTACAAA GATGGAAGCT 
    GGGATTACAA TCTGATCGGA TCTCATAAGT TGCAGAAAAA CGCAAGTGCA 
    GCTTGTGGAG CCATATTTGA CCTCAAACAC CTTAAAGAAT CTTCATATTC 
    AGGTAACTTC AAATCTACAT TACTTTTCTG TTCCTTTACT CCTCCTCTTT 
    ANATCATTCT CCTTGGGTCT CATACATTTT CACATGAATA ATAGGTATTC 
    TCAACCTCAA GTNTTGGACC GGANAGTCAA ATGATTTCCC AACCTAAANC 
    AGNGATCGNN CCCNANNTNN NGNTGNNNAN CANGANNGNN NNGAAAACGA 
    AGGNNCNTGG NNNANANNTN NNNNATANNN ACCATNTNTA NNNANCNNGA 
    AA

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22849295 [Map]; Strand: c
      • AT3G61730.1 - [+] show detail - reduced male fertility
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 13-5133-1 - 3-prime edge 
    ATTGTAACAT CCGTTCTATG GTTCCTTCCC TTGGGAATTT CAGACGACCA 
    CTCAAACTCT CAGTCAGGAG TGAAGTTCGA GAGTCAAGAA CAAAGGCACC 
    TATCCGCATC CAATCTATAA TGACAGTGTC AAAACGAGAT CAAAATGAGG 
    CTGTGATCAG CAAATGAAGT ACTTCAAAGT CAAAGATCTG TACAACATCT 
    TAACATGACT AAGAAGAGAG TATGATGGAT C

AT3G61730.1

Model type
Protein coding
Short Description
reduced male fertility
Curator Summary
Encodes a nuclear localized F-box protein that is involved in tapetal layer degeneration and pollen development. Interacts with ASK1 and that interaction is mediated by the F-box domain.
Computational Description
REDUCED MALE FERTILITY (RMF); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36000.1); Has 49 Blast hits to 49 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR