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13-5179-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 480565 [Map]; Strand: c
      • AT1G02390.1 - [+] show detail - glycerol-3-phosphate acyltransferase 2
        Distance: -287; Region: promoter
    Flanking Genome Sequence: 13-5179-1 - 5-prime edge 
    GNGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCGTA ACGGTTTAGT GTGAATTAGA TATCGAAACC 
    AAATAATCTA AATAAGAGTT TGTTAAGTTA ACTTAAATCT GTTTTTTACA 
    AGGGATAAAT TAACTACCAG ATATTATGAA TATACAATCA TACAAATACA 
    AGTCTTTTTA TAGTAGTAGA CTTATAGTTT TAGCACGTTC AATTTCCAAT 
    TACTCGGCTG CTGAGAGATC GAGCCACTTG ATTAACGTCA TTCATCGATT 
    TGAAAAAATA AAATATAAGA TAAAGTTGAC TAAGAGATCA TACTGCCTGA 
    GATCCGTTTA ATATTGCGAA TT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 480612 [Map]; Strand: c
      • AT1G02390.1 - [+] show detail - glycerol-3-phosphate acyltransferase 2
        Distance: -240; Region: promoter
    Flanking Genome Sequence: 13-5179-1 - 3-prime edge 
    AAACCGTACC AAAAAAGAAG AAGCCGACTT TAAATTGAAT TATTCCTTAA 
    GTCTTCTCAC ATTTTATCTT TGCTAGAGAC GCAATATTTG GAATAGATCA 
    AGCCGAACTA AATATCGACG CGTACGTGTA CTTTTTCAGA TTTAAACATT 
    CAGATCATTA ATTACAATCA TGCAAGCTGT ACGGGAAGAA GTGGAACCAT 
    CATCAATGGC ATTCCTCGTA AATATCAAAC ACGTTCGAAG GGTATTTACG 
    TCATGGTCTC ATTATATAAC TGTCAGAGCC CCTTCCGTTT CTCTCGACAT 
    GCAGAGTCTA GATTCCAGCG ACACCATATA ATATAGTTAT TAGAAAACGA 
    GAGGTCAAAA CCATGTCCGG TAATAAGATC TCGACTCTTC AAGCTCTTGT 
    CTTCTTCTTG TACCGGTTTT TCATTCTCCG TCGTTGGTGT CATCGTAGCC 
    CTAAACAAAA ATACCAAAAA TGCCCTTCTC ACGGCCTCCA CCAATATCAA 
    GACCTATCGA ATCACACTTT GATATTCAAC GTCGAAGGAG CTCTACTCAA 
    ATCAAACTCT TTATTCCCTT ACTTCATGGT TGTGGCATTC GAAGCCGGAG 
    GGGTGATAAG GTCACTTTTC CTCTTANTTC TTTATCCNTT TATAAGCTCC 
    ANNCNGGGCC NNNNACCANC GGG

AT1G02390.1

Model type
Protein coding
Short Description
glycerol-3-phosphate acyltransferase 2
Curator Summary
Encodes a member of a family of proteins with glycerol-3-phosphate acyltransferase activity.
Computational Description
glycerol-3-phosphate acyltransferase 2 (GPAT2); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 3 (TAIR:AT4G01950.1); Has 367 Blast hits to 357 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 4; Fungi - 0; Plants - 361; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR