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13-5181-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4358729 [Map]; Strand: c
      • AT1G12780.1 - [+] show detail - UDP-D-glucose/UDP-D-galactose 4-epimerase 1
        Distance: -401; Region: promoter
    Flanking Genome Sequence: 13-5181-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA ATATAGGTAT CGTTAAAAGA TAAATATTAA 
    GTGGACAACT TTAACGAAAA AACACAAAAA AGTTGATTGG ACAACGTTAC 
    TATCCAGTTT TTAGCGTGTT ATCCAACCCA TAGAAAATTT ATCTCTCTGT 
    TTTCCCATAA TCCTCGTAGA TTTTGGTCAT CACTAGTCAT TTATTTACAA 
    AAATAGGTTA AAAATGTCAT TGCGTAAAAA GAAAAGAAGA CTTAATCTTA 
    CATTATTTCC CTTTTAATTA TTAAAATCCG CCGAGAAAAG TTTCACCATC 
    AATGCGTAAC TGAAAATCGA CGAACCAAAG CTATAATACA CTTAAACGGA 
    TCATCATCAT CATCATCGTT GTCATGATCA TCACTGCCGT ATTTATAGAA 
    ACCAACAAAA ACATGAAAGA GCCCACTCAT TTTTCCTATT TTTCGCTTTG 
    CGTGCCTTCT TATCAACTTG TAAACAAAGC TACAAATATC TTTAAATAAG 
    GACCCAACTC TTTTTCAATT CCTCCCATCA ATCTTCTTCA TTTGTTCTTC 
    TGTTGGTGGT GGTGATCTAG TTTTCAAAGA ATCGATTTTG CCAAGGGGGT 
    TCTTCTTGAT AACCTTTCTT CTTCTTTGAA ATGGGTTCTT CTGNGGAGCA 
    AAACATTCTT GTTACTGGTG GNGCTGGCTT TATCGGGACG CATACTGTNG 
    TTCAACTTNT CAAAAATGGT TTTAAGGTTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4358733 [Map]; Strand: c
      • AT1G12780.1 - [+] show detail - UDP-D-glucose/UDP-D-galactose 4-epimerase 1
        Distance: -405; Region: promoter
    Flanking Genome Sequence: 13-5181-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TTGTCACAGA GACAGCAGAG ACCTACCGAT AACGTTATGA TCAAATTGAT 
    GACGTGTATC TACAACTTTA TTTAGGTATC CAATTTGGGT AAATGTTGAA 
    ATGTTTTGGT ACTAGAGTTA GCTAATAGGA TTTTGTTTTG AGAAGGAATA 
    TATGTTTCGT ATTTTTTTTT TTATANCAAA ANNTGTNTTT NTGTAAANAA 
    ATTTNNAAAT NTNTTCNNAN CATNAATTTT GCNTCANTTN GCANGTAAAA 
    ANGGCAAATT NTTCNATTTG NCNCAAATNG NGGGTAAAAN CTTTNNCTTA 
    AAANAANGGG GGANGTAAAN NATTTTNAAA NCCGGATANC NTANGTAAAA 
    ATCCAAAANT TTNTAANNNC AAANCCNTTT CNCANGGGTT TNGTNACCTN 
    GCCNTTTTNG CTTAAAANCA AAAAANCCCA AAACCCCGTA CCTTTCANCA 
    AAAAAAAAAN CAAGGGGGGN CNTTTNTNGG NCTTANCCCN CAANCTTNTN 
    AATNAATNTN CCAAACNTTT TCACAATNCA NTTGGGGGTT ACNGCAANCN 
    TCAAAAAANG TNTTGGGNCC GANCTTTNTT GATTAAAGTT CAAATGCTAA 
    ACNCTTTANC NGGAACGGGT GTANTAAAAG NCCTNTTTTT CAAACNGNGC 
    TNNCAAAAAT AAAAAAGGGN NCCNTTTTNC TTACCCGGNN CNGGCNCNNT 
    NGGGGNNTGT TTNGNNNCCT NNNNCCN

AT1G12780.1

Model type
Protein coding
Short Description
UDP-D-glucose/UDP-D-galactose 4-epimerase 1
Curator Summary
Encodes a UDP-glucose epimerase that catalyzes the interconversion of the sugar nucleotides UDP-glucose UDP-galactose via a UDP-4-keto-hexose intermediate. Responsive to stress.
Computational Description
UDP-D-glucose/UDP-D-galactose 4-epimerase 1 (UGE1); FUNCTIONS IN: UDP-glucose 4-epimerase activity, protein dimerization activity; INVOLVED IN: response to stress, galactose biosynthetic process; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 32 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose 4-epimerase (InterPro:IPR005886), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucose/UDP-D-galactose 4-epimerase 3 (TAIR:AT1G63180.1); Has 42430 Blast hits to 42420 proteins in 2995 species: Archae - 799; Bacteria - 25009; Metazoa - 650; Fungi - 500; Plants - 1081; Viruses - 38; Other Eukaryotes - 14353 (source: NCBI BLink).
Link
InterPro Scan - TAIR