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13-5201-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3691684 [Map]; Strand: c
      • AT1G11070.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: Hydroxyproline-rich glycoprotein ...
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: 13-5201-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCC ACACCTGGCG CAAGAGGAGG CTTGGGAGCG 
    AAGAAAGTAA CTAGTAAACT GAAGAGATCA ACCCATTTAG GGGCCCTATT 
    TAGATTCCTC AAGGGGAAAT TAGAAGGGAA GAATCCAGAA GTAAGATCTC 
    GTGGCGCNTG GAGGAGGAAG TAAAGGCGCG ACTGGAAGCG CTCCAGCCAG 
    CGGAAAGCAA GGAATGGCTG ATGCTCTTGC TGAGATAACA AAGAAGTAAA 
    TCACATCTCA CTTCACTTAT AAACAACAAA ATGGTCAAAA CTCATACTTG 
    CTTAATGGCT ACACAGGTCT CCTTATTTTC AGAAGATAGA AGAGGATGTT 
    CGAATGTATA TGACTTCAAT CAATGAGCTT AAGACAGATA TTACAAAGTT 
    CAAGAACAAG GACATTACCG AGCTTCAAAA ATTTCACCAT CGTATTGAAT 
    CAGTTCTTGA GAAACTAGAA GATGAAACAC AGGTTAGTGA TAACAACATA 
    AGTGATCAAT GTCACAAAAC TTTCTTCATC ATGTTCGGAT TTTGTGATCA 
    CAATAATGTT TGAACTGTGT TAGGTTCTAG CAAGATGTGA AGGATTCCCG 
    CATAAGAAAC TCGAAGCAAT AAGAATGGCT GCTGCATTAT ACTCGAAGCT 
    GGAGGGTATG ATCAAAGAGC TAAAGAACTG GAAGATAGAG ACTCCGGCGA 
    ACCAACTTTA CGATAAN

AT1G11070.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: Hydroxyproline-rich glycoprotein family protein (TAIR:AT1G61080.1); Has 579 Blast hits to 567 proteins in 152 species: Archae - 0; Bacteria - 68; Metazoa - 159; Fungi - 113; Plants - 172; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).
Link
InterPro Scan - TAIR