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13-5252-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 4228136 [Map]; Strand: c
      • AT2G10735.1 - [+] show detail - pseudogene, hypothetical protein
        Distance: -1630; Region: intergenic
      • AT2G10760.1 - [+] show detail - transposable element gene
        Distance: -3417; Region: intergenic
    Flanking Genome Sequence: 13-5252-1 - 3-prime edge 
    CTTTTGGCAA GGAGAAATTT GGGAGTTAGA AAATTCATGT CAAACGAAGC 
    TACCACAAGG TTCGAAAAAG AAAAATGAAG AGTGACCATC GTTCTCACTC 
    GTTACATTTA GCTTTTCGTG TTCACTCGCC AAGAGATAGA TTGTATCTCG 
    GTGATACAGC TCCAATTCGA TGGCAGTGAA TATGGCAAAG GACAATCAAC 
    ATACAGGAAC TCGGAGGGCT CGTTTCAAGC AACGTTTCCA CCAATTTCAG 
    AAACGAAGAG ATAGGGATAG ATATCGGGTG ATGATAGCTT CATTTAGATC 
    AAAGCATAGA TCATGGGTGG TTGCAAAGAA AAAGGAGAAA ATCAGCTCTC 
    ATACATTCTC GTTTCCTCCT CTCGGACAAT TGGCTGTGAG TGATGATGAG 
    TGTTACAGGG GAGATAGCTT GGTGATGATT CCACAAAAGG CTAGTGAACT 
    GAGTTTACTA GAAGGTGCAG GAACGCTTCT TACTACAGTG AATGAAAGAA 
    GTGATGGGAT TTTTTATGCA AGGAAGATTC AAGGTACAGA TAAGAAACAA 
    ATTACTGGTT CTTCTATGAC TGACATAGTG TTCATGAATG GAATTAGGCT 
    TATTGAATCT TCTGTCCTTA NCCGAATTTT GGATCACCAN CCCGGGCCGT 
    NGACCACNCT GNCCCNTNT

AT2G10735.1

Model type
Pseudogene
Computational Description
pseudogene, hypothetical protein
Link
InterPro Scan - TAIR

AT2G10760.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 6.5e-285 P-value blast match to GB:CAA31653 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)
Link
InterPro Scan - TAIR