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13-5259-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3403886 [Map]; Strand: w
      • AT5G10770.1 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 13-5259-1 - 5-prime edge 
    GAAATTGGTG TGAATTTAAC GGATCTGGAG ATTCCGGCGG ATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3403816 [Map]; Strand: w
      • AT5G10770.1 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 13-5259-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAA 
    TTTCAACCAT CACTGATGGA ACTTCCTTCT ACGGCCTTAA TATCGTCGCA 
    ATCACCGTCG GCGGTCAGAA ATTGCCGATT CCTTCAACTG TATTCTCTAC 
    TCCGGGAGCT TTAATCGATT CCGGCACCGT TATCACTCGT CTCCCGCCGA 
    AAGCCTACGC GGCGTTACGA AGCTCGTTCA AGGCGAAGAT GTCAAAGTAT 
    CCGACCACGT CGGGCGTCTC GATCTTGGAC ACGTGTTTCG ATCTCAGCGG 
    GTTTAAGACG GTGACTATCC CGAAAGTGGC GTTCTCTTTC AGCGGTGGCG 
    CCGTCGTGGA GCTTGGTTCG AAAGGGATAT TTTACGTGTT TAAGATATCT 
    CAGGTTTGTC TGGCGTTTGC AGGGAATAGC GATGACAGTA ACGCTGCCAT 
    CTTTGGAAAC GTTCAGCAGC AAACGCTAGA AGTTGTGTAT GATGGTGCGG 
    GTGGGCGGGT CGGGTTTGCT CCAAACGGGT GTAGTTAAGT TAGTTAATGA 
    AAAACAGAAC GGGGTAAATT TTAAATTTAT GGATTTGGCA CAAATTAGCT 
    TTATCCTTAA TCAAGTGTGT AATTTGGGTA AAGATCGGAA TT

AT5G10770.1

Model type
Protein coding
Short Description
Eukaryotic aspartyl protease family protein
Computational Description
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: DNA binding, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G10760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR