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13-5259-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3403886 [Map]; Strand: w
      • AT5G10770.1 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 13-5259-1 - 5-prime edge
    GAAATTGGTG TGAATTTAAC GGATCTGGAG ATTCCGGCGG ATC
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3403816 [Map]; Strand: w
      • AT5G10770.1 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 13-5259-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAA 
    TTTCAACCAT CACTGATGGA ACTTCCTTCT ACGGCCTTAA TATCGTCGCA
    ATCACCGTCG GCGGTCAGAA ATTGCCGATT CCTTCAACTG TATTCTCTAC
    TCCGGGAGCT TTAATCGATT CCGGCACCGT TATCACTCGT CTCCCGCCGA
    AAGCCTACGC GGCGTTACGA AGCTCGTTCA AGGCGAAGAT GTCAAAGTAT
    CCGACCACGT CGGGCGTCTC GATCTTGGAC ACGTGTTTCG ATCTCAGCGG
    GTTTAAGACG GTGACTATCC CGAAAGTGGC GTTCTCTTTC AGCGGTGGCG
    CCGTCGTGGA GCTTGGTTCG AAAGGGATAT TTTACGTGTT TAAGATATCT
    CAGGTTTGTC TGGCGTTTGC AGGGAATAGC GATGACAGTA ACGCTGCCAT
    CTTTGGAAAC GTTCAGCAGC AAACGCTAGA AGTTGTGTAT GATGGTGCGG
    GTGGGCGGGT CGGGTTTGCT CCAAACGGGT GTAGTTAAGT TAGTTAATGA
    AAAACAGAAC GGGGTAAATT TTAAATTTAT GGATTTGGCA CAAATTAGCT
    TTATCCTTAA TCAAGTGTGT AATTTGGGTA AAGATCGGAA TT

AT5G10770.1

Model type
Protein coding
Short Description
Eukaryotic aspartyl protease family protein
Computational Description
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: DNA binding, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G10760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR