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Mutant Lines
13-5271-1

13-5271-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 7890574 [Map]; Strand: w
- AT1G22340.1 - [+] show detail - UDP-glucosyl transferase 85A7
  Distance: 0; Region: exon2 (CDS)

CTCAAGATTC ATGACCGACG AACCATGTTT ATACCTCGTC GCTTCCTCGG 
CCAACCGCCG CCACTCTTCC GCCTTTTCTC TCAGCTTTTT CCCCTTTTCT 
CCATCCATAA GTTCTCTAAC CACCGTCTCG ACCTCCTCTC TCTTCACATC 
TTTACCAATC TCTATACCCA CTCCCCACTC GTCACAACAA AACTTACAAT 
TCGTCGGTTG CTCCGAAAAA CATGGCCAAC ATATCATCGG AACACCACCA 
GCGAGACTCT CCAATGTTGA GTTCCACCCG CAATGCGTCA AGAACCCTCC 
TATCGCGGGA TGAGAAAGAA CTTTCTCCTG AGGAC

3 prime edge [+] show sequence

Chromosome: 1; Position: 7890458 [Map]; Strand: w
- AT1G22330.1 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: 924; Region: intergenic
- AT1G22340.1 - [+] show detail - UDP-glucosyl transferase 85A7
  Distance: 6; Region: intergenic

ATCTTGAGAC GCTTATACAT AAAGTTTTCT TAGAAAATCT TAGATGAGAA 
AAGTTCTAAT GCGGTAGTTA ATTACAAATA TCATATGATA GTTTTGGTGG 
TAGACCCTAG AGGCCTATAG ATGTGTTACC TCGTTTCTTT TATATAATTA 
TAATTGGTCT TTATTTTCTG TTTGTAATCA GTGTAAATTG CTATAGAATA 
ACTTTAGCAT AATAACTTTT ATTTTTGTTT GTTGATACCA AAATATTGTT 
AGAATCACAC CACTAATATA AACTTCAACA AAAAAAAAAC TTCNTNTTTT 
CCTGNGCAAN ANGTNCTACG GAANCAAATT TTGTNTTCAA GTNTAAAAAA 
AAACACATTT CCTGNGCAAN AAAACAAGTC CTNTNTACAT NTTTTCGCNC 
CTTGCCNACC ANTNGGCNAA TGAAAGGNCN CTCTTGCTGG AGGCGGTCCG 
TAGGTAAAAG GNCCTTTNGG GTCAAAATCA NCGGGGCNCC CANTNTGTTN 
TGTNTNCGGC CCGGCCCACT NTATCCTATG GGAGGNGGGA AGTTAAATAG 
TGGNATTTNA ATCATCAANC TTATGGAGTT TTGACAANGT ANCCGAACAT 
NTNCCCAAAA ACGGGNTTTT ATCATCAATC TCATTAATNA TNACCTNTAA 
NTTTNAATAG TNCTNTTTNG CNCACTANTT NTNAACCNGA NCNAANGNNN 
ANGTTGANCT ANTNACCG

AT1G22330.1

Model type: Protein coding
Short Description: RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description: RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G78260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G22340.1

Model type: Protein coding
Short Description: UDP-glucosyl transferase 85A7
Computational Description: UDP-glucosyl transferase 85A7 (UGT85A7); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A2 (TAIR:AT1G22360.1); Has 7763 Blast hits to 7662 proteins in 424 species: Archae - 0; Bacteria - 289; Metazoa - 2112; Fungi - 32; Plants - 5212; Viruses - 58; Other Eukaryotes - 60 (source: NCBI BLink).
Link: InterPro Scan - TAIR