1. Home
  2. Mutant Lines
  3. 13-5315-1

13-5315-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
vascular leaf (PO:0009025)
  • decreased length (PATO:0000574)
    (Leaves::short petiole)

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 27879273 [Map]; Strand: w
      • AT1G74140.1 - [+] show detail - Rhomboid-related intramembrane serine protease family protein
        Distance: 0; Region: intron6 (CDS)
      • AT1G74140.2 - [+] show detail - Rhomboid-related intramembrane serine protease family protein
        Distance: 0; Region: intron6 (CDS)
      • AT1G74140.3 - [+] show detail - Rhomboid-related intramembrane serine protease family protein
        Distance: 0; Region: exon6 (CDS)
      • AT1G74140.5 - [+] show detail - Rhomboid-related intramembrane serine protease family protein
        Distance: 0; Region: exon6 (CDS)
      • AT1G74140.4 - [+] show detail - Rhomboid-related intramembrane serine protease family protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 13-5315-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    ATTACATGCA CTCGGAGCAT CAACGCAAAG TATGTTGTAA CTTTTGGGTA 
    GATGAACATA TCGAGAAGCG CGATGGCAAA CGTAGATCCA TCAGCACCCT 
    GTACACAAAT AGGAAAGAGT TTACCTCATC GGCATTTGGT GATCCAAAAA 
    CAAGTGCATG TGCATTTTCG TCTCACTCTC TATATCTATC AACCAAGTCT 
    GTTCATGCTC AGACAAATCA TTTAGTTAGG TGAGTACGAA CATACCAGCA 
    GCTGCGAAAT GGGGGCTGTT GATTGATGAT CCTTAATGAC AACTCCTTCA 
    CCCTGTATGA TTGACCAGCC AATATCAAAG GTAAAGCATT TCGTTTAATC 
    TCCAGAGGTA AAATCATTTA GTCTAAACCT CAAAACTTCG TTTTGCACAT 
    ATAACATGTA CTGCAAATGA AATGCAACAT GATCAATGAA AGAAACTATC 
    AATCTGTGGA CCTTGTTGGG TAAGCT

AT1G74140.1

Model type
Protein coding
Short Description
Rhomboid-related intramembrane serine protease family protein
Computational Description
Rhomboid-related intramembrane serine protease family protein; FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, chloroplast; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: Rhomboid-related intramembrane serine protease family protein (TAIR:AT1G74130.1); Has 861 Blast hits to 861 proteins in 374 species: Archae - 8; Bacteria - 572; Metazoa - 38; Fungi - 80; Plants - 52; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G74140.2

Model type
Protein coding
Short Description
Rhomboid-related intramembrane serine protease family protein
Computational Description
Rhomboid-related intramembrane serine protease family protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: Rhomboid-related intramembrane serine protease family protein (TAIR:AT1G74130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G74140.3

Model type
Protein coding
Short Description
Rhomboid-related intramembrane serine protease family protein
Computational Description
Rhomboid-related intramembrane serine protease family protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: Rhomboid-related intramembrane serine protease family protein (TAIR:AT1G74130.1); Has 760 Blast hits to 760 proteins in 306 species: Archae - 12; Bacteria - 576; Metazoa - 0; Fungi - 6; Plants - 52; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G74140.4

Model type
Protein coding
Short Description
Rhomboid-related intramembrane serine protease family protein
Computational Description
Rhomboid-related intramembrane serine protease family protein; FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, chloroplast; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: Rhomboid-related intramembrane serine protease family protein (TAIR:AT1G74130.1); Has 707 Blast hits to 707 proteins in 311 species: Archae - 8; Bacteria - 448; Metazoa - 38; Fungi - 74; Plants - 51; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G74140.5

Model type
Protein coding
Short Description
Rhomboid-related intramembrane serine protease family protein
Computational Description
Rhomboid-related intramembrane serine protease family protein; FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, chloroplast; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: Rhomboid-related intramembrane serine protease family protein (TAIR:AT1G74130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR