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13-5328-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 39257 [Map]; Strand: c
      • AT4G00110.1 - [+] show detail - UDP-D-glucuronate 4-epimerase 3
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-5328-1 - 5-prime edge 
    CTCAACACTA AGGTCCCCTT CTCCGAGAAA GACAGAACTG ACCAACCAGC 
    TAGTCTCTAT GCTGCTACTA AGAAGGCTGG TGAAGAGATT GCTCACACTT 
    ACAATCACAT CTATGGACTC TCTCTTACTG GCTTGAGGTT TTTCACCGTC 
    TATGGTCCTT GGGGAAGGCC TGACATGGCC TATTTCTTCT TCACCAGAGA 
    CATTCTCAAA GGGAAAGCCA TTTCAATCTT TGAGGGGGTC AACCATGGAA 
    CCGTGGCTAG GGACTTCACT TACATTGATG ACATTGTCAA GGGGTGTTTA 
    GGGGCTTTGG ACACGGCTGA GAAGAGCACT GGTAGTGGTG GTAAGAAGCG 
    CGGTGCGGCT CAGTTACGGG TTTTCAATCT CGGCAACACT TCGCCCGTTC 
    CAGTGACTGA TCTTGTCACC ATTCTTGAGA GACTTCTCAA AGTCAAGGCC 
    AAGAGGAACA TTATGAAGTT GCCGAGGAAC GGGGATGTGC AGTTCACTCA 
    TGCTAATATC AGTTCTGCNC ANAGAGAGCT CGGCTACAAA CCCCACCACC 
    GATCTTCANA CGGGTCTCAA GAAGNTTTGC GANATGGTNT TTTGGGTTAC 
    TACAANTGGC NGGAAAGAAA GCTGCANCTG ATGATTGNAC TNTCTGCAAT 
    GAGGTTGGAN CCTCTNTTTT TTTTTTTNGG GNNAAAANTT NGGANNNGNN 
    CCCGNTNNAA NCCN

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 39373 [Map]; Strand: c
      • AT4G00110.1 - [+] show detail - UDP-D-glucuronate 4-epimerase 3
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-5328-1 - 3-prime edge 
    GTGTTGAGCC CGTAGACAGA GCTAGAGGAA GCCCAGACAA TGGCGGGTTG 
    GGGATTGGCA GATTTGCAAA CCTCAAGGAG ATTGACGAAG CCAGCGATGT 
    TACTGTGAAC ATAAGAGCTA GGATTTTCCA TGGCGTACCT GACACCAGCT 
    TGAGCAGCCA AATGCATAAC GTGGGTAAAG GGAACAACTT CAAAGAGCTT 
    CTTCAAGAGA GCAGCGTCAT TGATGTCTCC TTCAACAACA AACACTCCGC 
    TTCTCTCCAA AAGGGCTTGC CTTGCTCTCT TGAGCGATGG ATCGTAGTAA 
    TCGTTGAAGT TGTCAAGCCC CAGAACGCCA TCTCCGCGGC GTTTGAGAGC 
    GGCGGAGACA TGGGTACCGA CGAAACCGGC GGCTCCGGTG ACGAGAACAG 
    AGAAACCGCG GCGGGTACGG AGACGGGCGG AGGATCTGAC CCGTTTCTCC 
    CAAGCGGGTC CACCCCAGGA GTAGGTACGA AGAGAACGGC GAGAAGGATC 
    GGCGGGATTG GAGGAAACGG GAGATCGGTA GAAGAAGATG AAGATCAAAC 
    CAACGAAGAC GAGAGACCAA AAGGCGAGCT TGGCGACGGA NGATTGCCAC 
    CGCGTACGGT GGAAGTAGGG CTTGAACTTG CCAGGCGTNG AAGGAATATN 
    ATCAAGATGC NACATTTGCT TCATNTTTAC CTCTACANAN ANAATCTCTT 
    TTNTTTGANG TTTCTTTTTT TTNTGG

AT4G00110.1

Model type
Protein coding
Short Description
UDP-D-glucuronate 4-epimerase 3
Curator Summary
Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase.
Computational Description
UDP-D-glucuronate 4-epimerase 3 (GAE3); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 43399 Blast hits to 43389 proteins in 2971 species: Archae - 792; Bacteria - 26013; Metazoa - 773; Fungi - 412; Plants - 1214; Viruses - 37; Other Eukaryotes - 14158 (source: NCBI BLink).
Link
InterPro Scan - TAIR