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13-5384-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30104462 [Map]; Strand: w
      • AT1G80020.1 - [+] show detail - transposable element gene
        Distance: -563; Region: promoter
    Flanking Genome Sequence: 13-5384-1 - 5-prime edge 
    GGGATGATGA GCTGATTTTG TTCGGCTCTG CTTCTTTCTT TTTGATCGAA 
    AGAGATTCTC AATAGAGAGA GAGAGAGAGA GAGAGAGGCT ANACTCTTCT 
    CTNGCGTGTG TTNNGGACCT TATTATCACG GCNNGGGTTN NGAGCTTTTT 
    TTCTTTTNGG CCTTTTCTCT TCNCCTNTAT ATATATCATA TANNCCATGT 
    GGGGNGGGCA AAANNGGTAT TCACTCACAT TCCCTCTTCT NCAAAGATNT 
    ACTTNTATTT TTNCCTTTNC AGGCGCNCCT GTCTATCTGN CACACAAGAT 
    TNNAACTNTG CGTNAGTNNG CTNNACCGAA TATGTAAATT ATCTATATAA 
    AATNAAGAGG GANATCCNGN GCAAACACAC ACAAAGGGGG AAAANGGGGA 
    NTGAAAATTG NTATAAANGG CNCGGGNNGN AAANGGCATG ANTGCACTGC 
    GTNTGCTAGC GCNGGATCTT CTNAANTGTC TNTCTAAANC CTNTGGCTAA 
    AAANGCNNCC NCTCTGTATA NNAAAAAATA ACTCGAGNGG CTTCNNAATN 
    TNNGATANTC ATGTGNCATA AGCACACAAA AAAAAANCCC NTCTCNGGNA 
    NACTTTTCTT TTTTTANCCC CACGNGACGT GTTCNATNAA NAAACGCANC 
    CNTTTTCTGG ANAGGACNNN NTAAACNCCN NNGNCCCCCC ANNTNGGGGG 
    GGN

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30104346 [Map]; Strand: w
      • AT1G80020.1 - [+] show detail - transposable element gene
        Distance: -447; Region: promoter
    Flanking Genome Sequence: 13-5384-1 - 3-prime edge 
    ATCATCCCCA AAGCCCATTA ACCTCGTCTC GTCTCCTTCA TCTCTCTTTC 
    TTTTGTTTTT TCAAAAGTTT CGTTATTGCG CCTCGATTCG CGCTTCCCTC 
    AGTCGTATTC CCGCTGCTAC AATCTGTGAG TCCTAATCTT TTTCTCTCTG 
    TTAAGATCTC ATATCTTAGA TCTCGCTCTC TCTTCTTACT CGATTTTACT 
    CTGCTTTTCC AGATCGCCTG AATT

AT1G80020.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
hAT-like transposase family (hobo/Ac/Tam3), has a 5.0e-62 P-value blast match to GB:AAD24567 transposase Tag2 (hAT-element) (Arabidopsis thaliana)
Link
InterPro Scan - TAIR