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13-5446-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
whole plant flowering stage (PO:0007016)
  • late (PATO:0000693)
    (Flowering & Growth::late flowering)

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1711599 [Map]; Strand: w
      • AT1G05700.1 - [+] show detail - Leucine-rich repeat transmembrane protein kinase protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 13-5446-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAA TTTTCCCATC CTACTTTCGT TACCGACCGT TACCGAACTC 
    CGGCGGAGTT CCTCTCAAAA CTGAAGTTCT TGAGGGTTTT GTAAGTTCTG 
    GACATATCTT AACAAATGAG ATCGATAATT ATGGACTCTT AACTCTTAAC 
    AACATCTGCA NNANTNTAAA AAATANCACT CTTACCGGCA CNNNCCCATC 
    CGANTTNTNN NAANGATNNN ACACCGGNTN ATTCTCGCTA AGGCTAGGAG 
    AAAANCCNGG ACTCTGTACT GAGATGNNTT GCNNAAAAAG CAACAGCAAA 
    NAACTCGCNA TCCCGCTTGT CNCATCATTT GCAGCATTGN NCATCCTCTT 
    GTTATTGNCT GGTGTGTTTT GGAGAATCAG AAACCGGAGA AACAAGTCCG 
    GTACANTGAC AAATNTATCN CTATATCTTT CCTTTTACAT GCATATCTAT 
    CTGGTAATCA CATTACCANT TGTTAAAACT TTCTTTTGCA AAGTAAACTC 
    CGCACCTCAN ACCANTCCAA TGGCGAAATC GGAGAACAAA TTACTGTTTA 
    CCTTTGCAGA CGTTATAAAG ATGACAAATA ACTTCGGTCA AGTCCTCGGC 
    AAAGGAGGGT TTGGAACAGT CTACCATGGC TTCTATGACA ACCTTCAAGT 
    AGCTGTTAAA CTTTTATCAN AAACATCANC TCAAGGATTC AAANAGTTTC 
    NCTCTGAGGT ATTGNANNAN AACT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1711602 [Map]; Strand: w
      • AT1G05700.1 - [+] show detail - Leucine-rich repeat transmembrane protein kinase protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 13-5446-1 - 3-prime edge 
    ATGAAAACGG TAGGAGTTAC TCCGGNATGT CTCCGGTTAA GCCATTGTTT 
    GATAAGTCTC TGATAATAGA GTTGTCTTGT TCAAGTCAGA AAAAACTCTT 
    TAACAAAATA CAAAATTATA GGTATCATCA GAATCTTGAA TTAGGTAAAC 
    TCACAGCCTC TTGAATCATT GTGAGGTTAG AGAAGGAGGA AGATATATGA 
    CCCGTTAACC CGCTTGATGA TAAGTTCCTG CCTCCAATAG TGTAAATTTT 
    TTTCCTACTC AATATAGAAA ATCCACCGAC TGATCAAGAA GCGATTAAAA 
    TTAGACTACA CCTTACAGTG ATGTGATTCT TGGAGGAGTA AGACTATCAT 
    AACTGCAATT AAGGCCCTCC CAAATGTAGT CATTAGGCAA ACAAGGATCT 
    CCGTGCCAGT TCTTCTTCAC TTTATAACTC GTCTTTAGAC TCGTAACCGC 
    GTCACCTGTA AGTTTCAATT GAATGCATTG ATCAAACTGA GAAAAAAGAT 
    TGAACTTTGC TAGTCATGTT ATACTAGCAC AGACCATCCT CTTGGTTAGT 
    GAGAGACTGC GAGAAACTAT TTGCGACGTA GATCTCTAGA GCGTTAACAA 
    TTGGCGGAAG AGTGGACTTT GGGGTTCGAA CGAGTGAAAA CGCAATTTTC 
    GATTGGCTCT CANGGTTTAG AAAAAACGTG TTTGTCTGAA GATACTTGGG 
    GCTGAATCCA GCAGCAACTG TCACTCCGTT AATGCTGATG TCGAACTCTC 
    TTGTCTGGTT CGGTTTGAGA CTAAAA

AT1G05700.1

Model type
Protein coding
Short Description
Leucine-rich repeat transmembrane protein kinase protein
Computational Description
Leucine-rich repeat transmembrane protein kinase protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, stem, hypocotyl, root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase protein (TAIR:AT4G29990.1); Has 163331 Blast hits to 124125 proteins in 4749 species: Archae - 121; Bacteria - 14440; Metazoa - 44652; Fungi - 9862; Plants - 74464; Viruses - 498; Other Eukaryotes - 19294 (source: NCBI BLink).
Link
InterPro Scan - TAIR