1. Home
  2. Mutant Lines
  3. 13-5460-1

13-5460-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1211512 [Map]; Strand: c
      • AT1G04457.1 - [+] show detail
        Distance: -963; Region: promoter
      • AT1G04470.1 - [+] show detail - Protein of unknown function (DUF810)
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: 13-5460-1 - 3-prime edge 
    TCNNCGAGTG CGATCTCTCT ACCAACTCCN CGATCAACGA AACNAAAGAT 
    CTGTTNTNAA AAGCTACNAG CCCGGNNGGC GANCGCGCAG NGCCCTANAA 
    GAACCGNTGA AGATGACTNG GATTGANGCN NCTTANGATN TCTTNTATGG 
    CAGAGTGATN GCGCGNNTGT NCGCAGGAAT GANGAGANAT TANCNTTAAG 
    TNNTGTNTTN NGAGGCGNNA CGTGGANTGG ATGCTGACNT ACGCNACATG 
    TNCNGNGTNN AGGCTGTNGN NGAATACNGA GNTNTGAGTG TAGGANGATT 
    AACCGGNNAG NTGNAACCTC ANAGACATGT TGGCATGCAG ATGACGATTC 
    CTGCTTGAGT GAATT

AT1G04457.1

Model type
Pseudogene
Curator Summary
Pseudogene of AT2G33450; 50S ribosomal protein L28, chloroplast (CL28)
Link
InterPro Scan - TAIR

AT1G04470.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF810)
Computational Description
CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT2G33420.1); Has 201 Blast hits to 187 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 4; Plants - 177; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
Link
InterPro Scan - TAIR