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Mutant Lines
13-5468-1

13-5468-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 4; Position: 431468 [Map]; Strand: c
- AT4G00990.1 - [+] show detail - Transcription factor jumonji (jmjC) domain-containing protein
  Distance: 0; Region: exon13 (CDS)

GNGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTNT 
CNCATCCTAC TTTGTATGCC ATACAGTGCA ATTTTCTTAA GCTGCAATGC 
AGGGAGAAGA GAAGTGATAA GAACTCAAGC TGAAACTAGA ATATTATGAT 
TCAAAACGAG TAAGTTCCAA TATGATTCAG AATATTATGA TTGATAGTGT 
ACCTCCAATT TATCCTCGCT AGAACTGTGG TCTTTAGGCA ATCTCCGGAA 
CTCCTGTGTT AGCCTAAGGC ATTCTTCGAC GCTTTCAGGA GCCACAAAGT 
CTAGTGCCAC CTTTATGCAA GACTGGAAAC AGTCTGAATT TTAGGGAACA 
CTAACATAAA ATGTTGAGTT TTTTGCTTTT TTGAGGAAAG AATAACAATG 
AATGAGCAAA ATGTAGATGA ATGAAAAAAG ATGCAAGTTC CAGATTCATA 
AACATGATAT GTCGAAAATA GGGAATTTTA ACTAATTGCT TACCTGTCTA 
TTCCTCACTT GGTGAGGACA ACCTGCAGGT ATGAAAACTG CTTCGCCGAG 
GTGTTGCTCA AAGGTCCATG GTTCTATATC TGCATTTGAA GAAATACATA 
TATTCACCGT TTTCGTAGCA AAGATGAATC AAGAACATAG TCTGGTTAAG 
CGGCACATGT TTTAAGCATA AACCAGAATC TTACCAAATT CTTCTTTCAG 
CTGTTTCTTC TGGCTATCAC TCAAGAACAT AGTCTGGTCA TGAATTGGGT 
GAATAACCTG AATTAAACAG TGN

3 prime edge [+] show sequence

Chromosome: 4; Position: 390277 [Map]; Strand: c
- AT4G00910.1 - [+] show detail - Aluminium activated malate transporter family protein
  Distance: 0; Region: intron3 (CDS)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
TGACAGTCAG CACTCTAGCT ATAATGCTGA ATCTGTCATA ACAATTTTGG 
TTTCCTTATT CCCTTACCGT CTAACGAATC AGCAAGTTTT TCGAGGTTAC 
GTTCAATAAG ACGGTGAAGC TGAGATCCTG CCCAAATCGG ACAGAAGAAG 
ACAGTAATGA TAATGCAAAT AGATGTTCCT ATTGCAATAG TTGATACTCT 
TTGCTGAGCC AATTCAACAA GCT

AT4G00910.1

Model type: Protein coding
Short Description: Aluminium activated malate transporter family protein
Computational Description: Aluminium activated malate transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to aluminum ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: sepal, root, pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT1G08440.1); Has 1015 Blast hits to 1014 proteins in 357 species: Archae - 0; Bacteria - 624; Metazoa - 0; Fungi - 16; Plants - 351; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00990.1

Model type: Protein coding
Short Description: Transcription factor jumonji (jmjC) domain-containing protein
Computational Description: Transcription factor jumonji (jmjC) domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, RING-type (InterPro:IPR001841), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G11950.1); Has 966 Blast hits to 671 proteins in 113 species: Archae - 0; Bacteria - 8; Metazoa - 538; Fungi - 54; Plants - 301; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink).
Link: InterPro Scan - TAIR