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13-5471-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24499040 [Map]; Strand: w
      • AT5G60900.1 - [+] show detail - receptor-like protein kinase 1
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 13-5471-1 - 5-prime edge 
    TCTAGGAGTA TGTTCTGCGG TTTTATGTCA CAGTGTATGA TCTGCTCGCT 
    GCACTCTTCA TGTAGATACA AGATTCCACG AGCAATGGCC ACCGCAATAT 
    TCTTTCTATC TTCCCAGCTC GGCCTCGGAC GCCTGAAGAG AAAATTGGCT 
    AGCGTCCCTT GTGGTAAAAA CTCATAGACG ATCATCTGGC TCTGTCCTTC 
    GTTGCAGAAG CCAATGAGCC TCACTAGGTT CTTGTGGTGA ATCTGACCTA 
    TCACTTTAAC CTCATTCTTG AACTCTTTTT CGTTATCTAA ATCAAGACGA 
    TCTAGTTTCT TCACAGCCAC GGTAACTTCA GAACCACCGG CAACTTCTAA 
    ATATCCTTTG TAAACTATAC CAAAGGCTCC TCTTCCAAGC TCTTCCGTGA 
    AATCTCTTGT AGCCTCTGCA AGCTCTCCAT ATGTAAAGAC CCTCAAATTC 
    AACTCATTTG CAGTAGTTGT AGCTGTAGTC CGACCGATAT CTCTCGCTTG 
    ATTCTTCATC ATATTTTTAC TCTTCTTAGT CTTTCTATAA AGAGCAAGAA 
    GTATCAAAAA TCACAAAAGC TGAAGTTCCA AGTAGAACAG AACAAGCAAT 
    GATTAACCAG TCAAGTTTTT TCGCTCTGTT TCCGGTAACT GGAACATNCG 
    CGATGGAGCG GGTTCNAACC TTAATGAATG TATCACTATC ACCACGTGGA 
    GATCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24498924 [Map]; Strand: w
      • AT5G60900.1 - [+] show detail - receptor-like protein kinase 1
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 13-5471-1 - 3-prime edge 
    CTCCTAGATG AGTATTACAC TCCTCGGATC TCGGATTTTG GTCTAGCAAA 
    GCT

AT5G60900.1

Model type
Protein coding
Short Description
receptor-like protein kinase 1
Curator Summary
Encodes a receptor-like protein kinase.
Computational Description
receptor-like protein kinase 1 (RLK1); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: lectin protein kinase family protein (TAIR:AT1G34300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR