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Mutant Lines
13-5497-1

13-5497-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 18361790 [Map]; Strand: c
  - AT4G39470.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
    Distance: -620; Region: promoter
  - AT4G39480.1 - [+] show detail - cytochrome P450, family 96, subfamily A, polypeptide 9
    Distance: -468; Region: promoter
Flanking Genome Sequence: 13-5497-1 - 5-prime edge
```
GGGAAAAACT AACAAAATCG GTTATACAGA TAACGGTCGG TACGGGATTT 
TCCCATCCTA CTTTCATCCA CTGGCCGGTG GTGTTTGATA CAGACGTTTG 
TGATGTCTTG TGTACCTACC TTTGGGTTCT TGTCTACTTT GGCACATTTA 
GGTTCCATGG TCCTCTGGAT AATGGGTTTT CTTATCTACT TTGGCACAGT 
TCTTCCATAG TCTTAGATGA TGCTCCAGGA TC
```

3 prime edge [+] show sequence

Chromosome: 4; Position: 18361795 [Map]; Strand: c
- AT4G39470.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: -625; Region: promoter
- AT4G39480.1 - [+] show detail - cytochrome P450, family 96, subfamily A, polypeptide 9
  Distance: -463; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
CAATCCCCAG TGTTCAATTA TTATTGCTTT CATATCAATT AATACGAAAG 
ATACAGATTC ATGAGTTCTA ATGGTATCAA CAAGTACATA TGTGAAAGCT 
ATTAGAAGTT AAGAAAATGA CAGTATATAC AATATTTCCC GTTAAAGCTA 
ACTAACTTCT TATTTAGGCT TCTCATTTCA ACTTATTTTG GACTGAAAAT 
ATTTTTGCTA TTTCTTAAAT ATCAACATAA CCATTAATTT ATATCTACCG 
CAAATTCCTT TCAAGCGTGA TAAACCGTAA TACTTTATGT AAAAGTAACT 
TAATTTTCAT AAAAAAAAAA ATNCNGGCCC ATTAAAATNA AACTTACTAA 
TATNCTATTN ATTTTCTATN AACTTTNTTN AAAAAGTTTT TTTTTNGTTT 
TNGTTTTNGA AAAAAAAATT TANCGGGANA NTTNTTTTNT TTGGGGANAA 
ANANCNANTT TTNGNCCGTA ATNTGNCCNN NNCAAGGGNC CGTNGTTTTN 
AAAAANGGTT TTNNANTTCC CCCANNGCTN CANTCCCAAN CAANCAAANT 
GGGNCTTNGN CCCCAAAAAT ANGGGCCAAN CCCTCGGNTT NNGATTTTGG 
AACCGACNCC CNCAAATNCC CNNTTTTTGG GGCCCNNANN NNGGGGGCTT 
CNAGNNAANN TNCANANNTA NGGNCCCCCC NNNGGGGNNG AANNNAAACN 
TNCCNGNNA

AT4G39470.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Protein prenylyltransferase superfamily protein (TAIR:AT3G18420.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G39480.1

Model type: Protein coding
Short Description: cytochrome P450, family 96, subfamily A, polypeptide 9
Curator Summary: member of CYP96A
Computational Description: "cytochrome P450, family 96, subfamily A, polypeptide 9" (CYP96A9); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 96, subfamily A, polypeptide 10 (TAIR:AT4G39490.1); Has 26881 Blast hits to 26790 proteins in 1427 species: Archae - 44; Bacteria - 2309; Metazoa - 10094; Fungi - 5686; Plants - 7697; Viruses - 3; Other Eukaryotes - 1048 (source: NCBI BLink).
Link: InterPro Scan - TAIR