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13-5510-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3729827 [Map]; Strand: w
      • AT1G11150.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 13-5510-1 - 5-prime edge 
    CCAACAGTGG TTTGGTCGAA AGGTGTATGG TTCTCTTACT CTACGCCCAA 
    ATACTCATTC TTAACGTGGC TTCCAATTCA TAATAAATTA GCAACAGGGG 
    ATCGAATCAA GAAGTGGAAT ACNGGGGCAG CATGTACACT GTGTCTTATG 
    TACGAACACG GAGGAGACGA GAGATCATTT GTTCTTCTCC TGCCCATACT 
    CCTCAACGAT CTGGGAGAAC TTGGCACATC GCCTTCTTCA AACAAACTAC 
    TCATCAAATT GGCACCAGCT CACCGCAATG CTTCACAACA CAAGCACTCC 
    CCGGCTCCAC CTCTTTCTGC TTCGTTATGT CTTTCAAGCT ACTCTTTACC 
    ATATATGCCG CGAGAGGAAT GCTAGACGAC ACGGCGAGAT ACCTACCACA 
    ACAATTCGAC AAATCAAGCT AATCGATGGA ACCGTACGGA ACCGTCTCAG 
    CACAATCACA GCCACTAGCA ACCATCGTTA CAAGGATGGC CTGCAGCTTT 
    GGTTCTCCAC ACGCTCGTCC TCTTAGCCCG AGTGTTCTGT TTTTCTATGT 
    CAAACTCTGT TTCTACTTCT CTTCTAAATT TCAGCATGAA GTAGCATTTA 
    TTGTATAAAC GNTTATTGTT TGAATATAAT TTTACATTCT TTCAAAAAAA 
    NGNNNNNNCN NANNNNAAAA AAAAANCNAA AANCCCTGTT NNC

AT1G11150.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
pseudogene, similar to putative AP endonuclease/reverse transcriptase, blastp match of 30% identity and 3.2e-59 P-value to GP|21952510|gb|AAM82604.1|AF525305_2|AF525305 putative AP endonuclease/reverse transcriptase {Brassica napus}
Link
InterPro Scan - TAIR