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13-5527-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3787028 [Map]; Strand: w
      • AT1G11270.2 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: -40; Region: promoter
      • AT1G11270.3 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: -40; Region: promoter
      • AT1G11270.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: -38; Region: promoter
    Flanking Genome Sequence: 13-5527-1 - 5-prime edge 
    TNNACCTGCA ACCTNTTTGC AACCCTCTCT TTCTTTTGGG CTTTCAACCC 
    ACAATCCTTT TTCTTTGTCA CATAAAAAAA AGAAGTCCGT AAACGCCGGT 
    CCCAAAAAGA AAATAAAAAA CCCCTTGATT CTTGACATGA TTCAAAAAAA 
    AAAAANGGNT TGGNAAANTT TTTNNGGCCN AAAANAAAAN NTCCNCNAAA 
    ANGGNNGGAT TAAAAAANGG CTTGGNNNNA AANNNNNTTT TGGNTTNNAN 
    CNAAANNNNT TTTTNGNNNG GGNNCNNAGC NNGTTTNGGG GCCCCTTTTT 
    TTTTTTTNNN GGGGGGGGGG NAAAANNTTT TTTTNNNNNN NNCCNTTNNN 
    TTTTTTTAAA AAAGTNNNNT TNNNNGGGTN NNNNNGGGGG GGGGGNANNN 
    CCNNGNGNCC NNAAAAANNN GNGNNNNNNG

AT1G11270.1

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G34280.1); Has 1191 Blast hits to 1176 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1189; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G11270.2

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G34280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G11270.3

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G34280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR