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13-5529-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11584734 [Map]; Strand: c
      • AT1G32172.1 - [+] show detail - other RNA
        Distance: 4187; Region: intergenic
      • AT1G32180.1 - [+] show detail - cellulose synthase-like D6
        Distance: 1782; Region: intergenic
    Flanking Genome Sequence: 13-5529-1 - 3-prime edge 
    CTTGCAGATN NCCAGCNCGG GNNGNTTGCC AGANNNTTAC TATAGACCTT 
    NTTACNCATT ACNANGNCNN NNNGTNCCAN CTTNGCTTGG NTNAANCTCA 
    GAGAGACNCC TAGGNCTCGT ANNGCGCNNG NCCNNNANTN GAANCAGTGA 
    TNTGACTGAT GATGAAACAA TTTAAACTCA TCTACTTGAA CAAATANCAN 
    ANAAGTTTGA TGAAACANTT CCATAACATT AAACTCTTAT GATCACTCTT 
    TATAAATNCA TGTACAGCGA TTATCCTAAT TGGTANATC

AT1G32172.1

Model type
Other RNA
Short Description
other RNA
Link
InterPro Scan - TAIR

AT1G32180.1

Model type
Protein coding
Short Description
cellulose synthase-like D6
Curator Summary
encodes a gene similar to cellulose synthase
Computational Description
cellulose synthase-like D6 (CSLD6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose-synthase like D2 (TAIR:AT5G16910.1); Has 3332 Blast hits to 2680 proteins in 615 species: Archae - 13; Bacteria - 1453; Metazoa - 5; Fungi - 21; Plants - 1756; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink).
Link
InterPro Scan - TAIR